Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 CDY1-201ENST00000306609 2321 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 CDY1B-201ENST00000306882 2321 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC008171.1-201ENST00000395058 200 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC8.5□□□□□ -1.05
ERCC3P19447 BMS1P13-201ENST00000417301 885 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 NENFP1-201ENST00000419476 466 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 EIF4A1P2-201ENST00000422633 1220 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC093422.3-201ENST00000428506 305 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 AL161626.1-201ENST00000441480 490 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 BMS1P11-201ENST00000442351 885 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AL591719.1-201ENST00000444669 744 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 RPL7L1P11-201ENST00000446092 721 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC092570.2-201ENST00000452117 1143 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC093799.1-201ENST00000452411 499 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 HDAC1P1-201ENST00000455482 1445 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 BMS1P9-201ENST00000457640 885 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 RPL21P18-201ENST00000469899 480 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 RPL41-202ENST00000501597 469 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 AC010374.1-201ENST00000503762 1237 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC114940.1-201ENST00000512162 1265 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC8.5□□□□□ -1.05
ERCC3P19447 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC8.5□□□□□ -1.05
ERCC3P19447 IGKV2-29-201ENST00000521304 372 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 HAUS1P3-201ENST00000523909 662 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 RBMS2P1-201ENST00000525031 1226 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 OR8K4P-201ENST00000534608 872 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.5□□□□□ -1.05
ERCC3P19447 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.5□□□□□ -1.05
ERCC3P19447 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC021483.2-201ENST00000567415 758 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 CBX3P2-202ENST00000583365 535 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.5□□□□□ -1.05
ERCC3P19447 AL022067.1-201ENST00000602426 454 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC099785.1-201ENST00000605697 437 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC122710.3-201ENST00000606566 541 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AC016405.2-201ENST00000607393 312 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 C5orf56-207ENST00000621237 486 ntAPPRIS P5 TSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
ERCC3P19447 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 AL353795.1-201ENST00000439134 1775 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 AL078595.2-201ENST00000605309 1780 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 EIF4E2-207ENST00000409514 3525 ntTSL 5 BASIC8.5□□□□□ -1.05
ERCC3P19447 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
ERCC3P19447 DYNC1I2P1-201ENST00000435916 1838 ntBASIC8.5□□□□□ -1.05
ERCC3P19447 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
ERCC3P19447 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC025040.2-201ENST00000558657 1852 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 APP-206ENST00000359726 3294 ntTSL 2 BASIC8.49□□□□□ -1.05
ERCC3P19447 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 MTHFD2P5-201ENST00000320415 844 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC8.49□□□□□ -1.05
ERCC3P19447 IL6-202ENST00000401630 765 ntTSL 5 BASIC8.49□□□□□ -1.05
ERCC3P19447 ZNF602P-201ENST00000405929 924 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 ATF1P1-201ENST00000406040 927 ntBASIC8.49□□□□□ -1.05
ERCC3P19447 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
ERCC3P19447 MEG8-201ENST00000414488 800 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC8.49□□□□□ -1.05
ERCC3P19447 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms