Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNASEH2B-AS1-209ENST00000631080 1707 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 CNOT6LP1-201ENST00000559681 1462 ntBASIC7.49□□□□□ -1.21
NID1P14543 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AL359715.3-201ENST00000569267 2123 ntBASIC7.49□□□□□ -1.21
NID1P14543 WBP2NL-201ENST00000328823 2255 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NID1P14543 RAD9B-207ENST00000409778 1373 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 ABCA17P-204ENST00000494925 3478 ntBASIC7.49□□□□□ -1.21
NID1P14543 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 NRG3-206ENST00000545131 2713 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 RNU4-21P-201ENST00000362802 126 ntBASIC7.49□□□□□ -1.21
NID1P14543 RNU6-252P-201ENST00000363232 107 ntBASIC7.49□□□□□ -1.21
NID1P14543 SPRR1A-201ENST00000368762 270 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NID1P14543 SNORA75-201ENST00000384158 137 ntBASIC7.49□□□□□ -1.21
NID1P14543 Y_RNA.465-201ENST00000384293 102 ntBASIC7.49□□□□□ -1.21
NID1P14543 AC096664.1-201ENST00000393996 778 ntBASIC7.49□□□□□ -1.21
NID1P14543 AL356057.2-201ENST00000403318 432 ntBASIC7.49□□□□□ -1.21
NID1P14543 VN1R12P-201ENST00000403778 876 ntBASIC7.49□□□□□ -1.21
NID1P14543 AL096711.1-201ENST00000404780 554 ntBASIC7.49□□□□□ -1.21
NID1P14543 ATF1P1-201ENST00000406040 927 ntBASIC7.49□□□□□ -1.21
NID1P14543 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AL772337.2-201ENST00000411992 981 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 AC023669.1-201ENST00000414915 524 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 TCEA1P4-201ENST00000415066 844 ntBASIC7.49□□□□□ -1.21
NID1P14543 UBTFL3-201ENST00000418934 1024 ntBASIC7.49□□□□□ -1.21
NID1P14543 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 AL445430.2-201ENST00000423149 686 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 FABP5P1-201ENST00000423401 411 ntBASIC7.49□□□□□ -1.21
NID1P14543 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 MORF4L1P5-201ENST00000433352 961 ntBASIC7.49□□□□□ -1.21
NID1P14543 ARPC3P1-201ENST00000437218 533 ntBASIC7.49□□□□□ -1.21
NID1P14543 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 AL662791.1-201ENST00000441992 928 ntBASIC7.49□□□□□ -1.21
NID1P14543 GTF3AP5-201ENST00000442645 697 ntBASIC7.49□□□□□ -1.21
NID1P14543 RPL6P30-201ENST00000443382 862 ntBASIC7.49□□□□□ -1.21
NID1P14543 OR2AI1P-201ENST00000448534 932 ntBASIC7.49□□□□□ -1.21
NID1P14543 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 AL590369.1-201ENST00000455074 470 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 LINC02010-201ENST00000470860 516 ntTSL 4 BASIC7.49□□□□□ -1.21
NID1P14543 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AC068042.1-201ENST00000482222 1148 ntBASIC7.49□□□□□ -1.21
NID1P14543 RN7SL864P-201ENST00000493457 285 ntBASIC7.49□□□□□ -1.21
NID1P14543 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 HSD3BP4-201ENST00000511509 1120 ntBASIC7.49□□□□□ -1.21
NID1P14543 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 OR11J5P-201ENST00000556889 934 ntBASIC7.49□□□□□ -1.21
NID1P14543 AL132855.1-201ENST00000557368 207 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 AC011260.1-201ENST00000578420 472 ntBASIC7.49□□□□□ -1.21
NID1P14543 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AC083899.3-201ENST00000603413 594 ntBASIC7.49□□□□□ -1.21
NID1P14543 AL159169.2-201ENST00000610061 1269 ntBASIC7.49□□□□□ -1.21
NID1P14543 MIR6751-201ENST00000610479 63 ntBASIC7.49□□□□□ -1.21
NID1P14543 AC093838.1-201ENST00000613014 469 ntBASIC7.49□□□□□ -1.21
NID1P14543 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
NID1P14543 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
NID1P14543 LINC01620-205ENST00000637248 546 ntTSL 4 BASIC7.49□□□□□ -1.21
NID1P14543 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 AC117382.2-201ENST00000564748 3151 ntBASIC7.49□□□□□ -1.21
NID1P14543 AP4S1-211ENST00000616371 4595 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 CTAGE3P-201ENST00000454280 2404 ntBASIC7.49□□□□□ -1.21
NID1P14543 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.49□□□□□ -1.21
NID1P14543 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 EHF-201ENST00000257831 3150 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
NID1P14543 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 AP000641.1-201ENST00000531988 1639 ntBASIC7.49□□□□□ -1.21
NID1P14543 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
NID1P14543 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
NID1P14543 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.48□□□□□ -1.21
NID1P14543 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.48□□□□□ -1.21
NID1P14543 LINC01234-202ENST00000547963 2088 ntTSL 2 BASIC7.48□□□□□ -1.21
NID1P14543 EEF1A1P11-201ENST00000415278 1389 ntBASIC7.48□□□□□ -1.21
NID1P14543 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
NID1P14543 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms