Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC7.13□□□□□ -1.27
COL6A2P12110 HMGN1P17-201ENST00000513734 295 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC7.13□□□□□ -1.27
COL6A2P12110 AL132857.1-201ENST00000555180 708 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 SNRPCP20-201ENST00000588011 210 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 AL121985.1-203ENST00000588034 556 ntTSL 4 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC011492.1-201ENST00000600023 315 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 AL121809.2-201ENST00000613169 341 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC7.13□□□□□ -1.27
COL6A2P12110 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 AL590396.3-201ENST00000636334 300 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 AC132219.2-201ENST00000624416 2327 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 AL021877.2-201ENST00000624442 10684 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
COL6A2P12110 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
COL6A2P12110 UG0898H09-202ENST00000623646 7040 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
COL6A2P12110 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.13□□□□□ -1.27
COL6A2P12110 AC078880.4-201ENST00000617627 1749 ntBASIC7.13□□□□□ -1.27
COL6A2P12110 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 LPAL2-203ENST00000454031 2498 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC7.12□□□□□ -1.27
COL6A2P12110 CDY5P-201ENST00000411487 1580 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 CDY9P-201ENST00000451397 1580 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
COL6A2P12110 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.12□□□□□ -1.27
COL6A2P12110 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 AC130456.1-201ENST00000565085 1363 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL6A2P12110 RN7SKP211-201ENST00000363328 315 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 RNU6-1055P-201ENST00000391085 107 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 RN7SKP89-201ENST00000410774 242 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 TRIM60P17-201ENST00000415181 719 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 PTCD2P2-201ENST00000415579 1095 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AC005005.2-201ENST00000420779 380 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 DUTP4-201ENST00000424782 475 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC7.12□□□□□ -1.27
COL6A2P12110 RPL6P2-201ENST00000425480 783 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 MTCO1P45-201ENST00000431457 267 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AC002553.1-201ENST00000442828 802 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC7.12□□□□□ -1.27
COL6A2P12110 SCDP1-201ENST00000455244 1081 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 RPS14P8-201ENST00000478778 369 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 AC025176.1-201ENST00000510261 365 ntTSL 4 BASIC7.12□□□□□ -1.27
COL6A2P12110 AC140118.1-201ENST00000539209 532 ntTSL 4 BASIC7.12□□□□□ -1.27
COL6A2P12110 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC7.12□□□□□ -1.27
COL6A2P12110 AC126177.6-201ENST00000550420 1009 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 AGGF1P9-201ENST00000561884 913 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 CSNK1A1P1-202ENST00000563423 981 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.12□□□□□ -1.27
COL6A2P12110 MIR5192-201ENST00000579892 92 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 AC008635.1-201ENST00000600716 562 ntTSL 4 BASIC7.12□□□□□ -1.27
COL6A2P12110 AL365400.2-201ENST00000605604 902 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.12□□□□□ -1.27
COL6A2P12110 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC7.12□□□□□ -1.27
COL6A2P12110 AC135050.6-202ENST00000613584 392 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL6A2P12110 AC138904.2-201ENST00000614412 107 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 BX005195.1-201ENST00000618097 1198 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AC021422.1-201ENST00000621212 473 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AC016542.3-201ENST00000623520 619 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.12□□□□□ -1.27
COL6A2P12110 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC7.12□□□□□ -1.27
COL6A2P12110 AC007406.5-201ENST00000570140 3170 ntBASIC7.12□□□□□ -1.27
COL6A2P12110 SFTPD-AS1-201ENST00000608229 5001 ntBASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms