Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.27□□□□□ -1.25
TPM1P09493 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TPM1P09493 EEF1A1P12-201ENST00000443590 1346 ntBASIC7.27□□□□□ -1.25
TPM1P09493 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC7.27□□□□□ -1.25
TPM1P09493 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM1P09493 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.26□□□□□ -1.25
TPM1P09493 AC010624.4-201ENST00000597606 1351 ntBASIC7.26□□□□□ -1.25
TPM1P09493 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM1P09493 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
TPM1P09493 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TPM1P09493 NPM1P14-201ENST00000343743 866 ntBASIC7.26□□□□□ -1.25
TPM1P09493 RNU12-2P-201ENST00000364789 156 ntBASIC7.26□□□□□ -1.25
TPM1P09493 LCN1P2-201ENST00000372030 223 ntBASIC7.26□□□□□ -1.25
TPM1P09493 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 AL023284.3-201ENST00000407767 334 ntBASIC7.26□□□□□ -1.25
TPM1P09493 RNA5SP280-201ENST00000411230 115 ntBASIC7.26□□□□□ -1.25
TPM1P09493 NRIR-202ENST00000414795 506 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM1P09493 RPS17P17-201ENST00000419392 409 ntBASIC7.26□□□□□ -1.25
TPM1P09493 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 ANXA2P2-201ENST00000435128 1020 ntBASIC7.26□□□□□ -1.25
TPM1P09493 RPS13P2-201ENST00000437890 455 ntBASIC7.26□□□□□ -1.25
TPM1P09493 RPL29P7-201ENST00000440227 457 ntBASIC7.26□□□□□ -1.25
TPM1P09493 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM1P09493 RPSAP24-201ENST00000461543 873 ntBASIC7.26□□□□□ -1.25
TPM1P09493 RPL23AP68-201ENST00000480924 445 ntBASIC7.26□□□□□ -1.25
TPM1P09493 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 AC122710.2-201ENST00000506093 596 ntTSL 4 BASIC7.26□□□□□ -1.25
TPM1P09493 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM1P09493 RN7SKP11-201ENST00000517018 287 ntBASIC7.26□□□□□ -1.25
TPM1P09493 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.26□□□□□ -1.25
TPM1P09493 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.26□□□□□ -1.25
TPM1P09493 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM1P09493 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC7.26□□□□□ -1.25
TPM1P09493 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC7.26□□□□□ -1.25
TPM1P09493 AC017037.4-201ENST00000624526 826 ntBASIC7.26□□□□□ -1.25
TPM1P09493 AL121936.2-201ENST00000641935 662 ntBASIC7.26□□□□□ -1.25
TPM1P09493 AC105749.1-201ENST00000631338 2008 ntBASIC7.26□□□□□ -1.25
TPM1P09493 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.26□□□□□ -1.25
TPM1P09493 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
TPM1P09493 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.26□□□□□ -1.25
TPM1P09493 AP000432.2-201ENST00000624164 2048 ntBASIC7.25□□□□□ -1.25
TPM1P09493 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 AC023886.2-201ENST00000321285 411 ntBASIC7.25□□□□□ -1.25
TPM1P09493 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
TPM1P09493 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.25□□□□□ -1.25
TPM1P09493 AL360271.1-201ENST00000395679 510 ntBASIC7.25□□□□□ -1.25
TPM1P09493 AC007790.1-201ENST00000439081 782 ntBASIC7.25□□□□□ -1.25
TPM1P09493 SNORA35.1-201ENST00000458908 128 ntBASIC7.25□□□□□ -1.25
TPM1P09493 RPS12P20-201ENST00000464109 380 ntBASIC7.25□□□□□ -1.25
TPM1P09493 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.25□□□□□ -1.25
TPM1P09493 ANK3-213ENST00000486349 493 ntTSL 2 BASIC7.25□□□□□ -1.25
TPM1P09493 RN7SL518P-201ENST00000491887 280 ntBASIC7.25□□□□□ -1.25
TPM1P09493 RN7SL143P-201ENST00000496780 297 ntBASIC7.25□□□□□ -1.25
TPM1P09493 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.25□□□□□ -1.25
TPM1P09493 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC7.25□□□□□ -1.25
TPM1P09493 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
TPM1P09493 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC7.25□□□□□ -1.25
TPM1P09493 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC7.25□□□□□ -1.25
TPM1P09493 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.25□□□□□ -1.25
TPM1P09493 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC7.25□□□□□ -1.25
TPM1P09493 SNORA16A-202ENST00000628458 135 ntBASIC7.25□□□□□ -1.25
TPM1P09493 AP001153.1-201ENST00000641024 338 ntBASIC7.25□□□□□ -1.25
TPM1P09493 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.25□□□□□ -1.25
TPM1P09493 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
TPM1P09493 GOT2P1-201ENST00000440922 1309 ntBASIC7.25□□□□□ -1.25
TPM1P09493 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
TPM1P09493 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.24□□□□□ -1.25
TPM1P09493 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 RNA5SP114-201ENST00000363780 113 ntBASIC7.24□□□□□ -1.25
TPM1P09493 SNORA30B-201ENST00000365319 129 ntBASIC7.24□□□□□ -1.25
TPM1P09493 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC7.24□□□□□ -1.25
TPM1P09493 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
TPM1P09493 AC009518.3-201ENST00000438972 253 ntBASIC7.24□□□□□ -1.25
TPM1P09493 SNX18P9-201ENST00000440580 835 ntBASIC7.24□□□□□ -1.25
TPM1P09493 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 SCDP1-201ENST00000455244 1081 ntBASIC7.24□□□□□ -1.25
TPM1P09493 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.24□□□□□ -1.25
TPM1P09493 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC7.24□□□□□ -1.25
TPM1P09493 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC7.24□□□□□ -1.25
TPM1P09493 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.24□□□□□ -1.25
TPM1P09493 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.24□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms