Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RNA5SP302-201ENST00000364896 100 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 MIR99A-201ENST00000384906 81 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 RNA5SP35-201ENST00000391257 129 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 RPL31-202ENST00000409000 641 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 PPIAP23-201ENST00000420099 497 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL216P-201ENST00000471607 298 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL654P-201ENST00000479178 292 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC021146.11-201ENST00000503319 491 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 MTCYBP44-201ENST00000514835 823 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AP000662.1-201ENST00000530952 487 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AL135978.1-201ENST00000553618 1266 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 MIR4428-201ENST00000584884 73 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC099777.1-201ENST00000603779 1070 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AL121985.3-201ENST00000620690 523 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AP001153.1-201ENST00000641024 338 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 AC022306.1-201ENST00000560489 1562 ntBASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
HLA-DRB4X5D2U9 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 MIR187-201ENST00000385062 109 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL117344.1-201ENST00000407196 616 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 CYCSP17-201ENST00000407870 315 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL139135.1-201ENST00000412675 209 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC096537.2-201ENST00000413707 714 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL663061.1-201ENST00000416625 580 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 EIF4A1P2-201ENST00000422633 1220 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 GAPDHP57-201ENST00000424400 585 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 RPL34P27-201ENST00000428810 349 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL645936.2-201ENST00000430565 928 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 MEF2AP1-201ENST00000454867 863 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC002075.1-201ENST00000457396 676 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL868P-201ENST00000485915 303 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC117395.1-201ENST00000487390 403 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 OR51A1P-201ENST00000511110 946 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 IGKV2-19-201ENST00000518132 283 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC103855.4-201ENST00000533158 265 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC069240.2-201ENST00000550242 609 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 RN7SL426P-201ENST00000579106 295 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AL035410.2-201ENST00000604963 864 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC010333.3-201ENST00000615100 402 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 AC073857.1-201ENST00000625082 1054 ntBASIC5.06□□□□□ -1.6
HLA-DRB4X5D2U9 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms