Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AL109628.1-201ENST00000556877 366 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 ULK4P1-202ENST00000565174 503 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC007255.2-201ENST00000604053 631 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 BX323046.1-201ENST00000610145 535 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 TP53TG1_2.1-201ENST00000611226 182 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AL138693.1-201ENST00000622219 129 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 HPVC1-201ENST00000629899 1198 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AP000550.3-201ENST00000637734 379 ntBASIC7.02□□□□□ -1.29
DKK3Q9UBP4 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
DKK3Q9UBP4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CD300E-201ENST00000392619 3501 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AL451064.2-201ENST00000623514 1654 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 ATP5BP1-201ENST00000411980 1574 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 NPM1P38-201ENST00000403835 865 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC091492.1-201ENST00000419844 272 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 FABP5P1-201ENST00000423401 411 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC245047.1-201ENST00000433276 873 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 FABP5P2-201ENST00000439042 408 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 PPP1R2P6-201ENST00000478565 588 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC112206.4-201ENST00000515142 405 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 RN7SL32P-201ENST00000580514 281 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC010463.3-201ENST00000594077 500 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AP005131.7-201ENST00000610087 611 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 PDE4DIP-241ENST00000616206 874 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AP005212.3-201ENST00000619964 528 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC011471.4-201ENST00000638271 216 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 CASC19-212ENST00000641153 1287 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 MAPK10-365ENST00000641902 3825 ntBASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
DKK3Q9UBP4 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DKK3Q9UBP4 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC7□□□□□ -1.29
DKK3Q9UBP4 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7□□□□□ -1.29
DKK3Q9UBP4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DKK3Q9UBP4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7□□□□□ -1.29
DKK3Q9UBP4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7□□□□□ -1.29
DKK3Q9UBP4 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DKK3Q9UBP4 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
DKK3Q9UBP4 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms