Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP003175.1-201ENST00000641383 6658 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 RNU6-1017P-201ENST00000363613 106 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 GCNT6-201ENST00000379591 934 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 MTATP6P31-201ENST00000406985 692 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 OR7E117P-201ENST00000422682 1112 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 GAPDHP55-201ENST00000423136 803 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 MTND4LP14-201ENST00000429447 288 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 FECHP1-201ENST00000431896 1214 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 GTF2F2P2-201ENST00000445825 721 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AP000662.1-201ENST00000530952 487 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 EEF1B2P1-201ENST00000567221 672 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC068408.1-201ENST00000577406 1144 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC024085.1-201ENST00000604299 432 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AL683813.2-201ENST00000605245 502 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 AC132825.8-201ENST00000640783 297 ntBASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 C1D-202ENST00000407324 1379 ntTSL 3 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.53□□□□□ -1.36
AMBRA1Q9C0C7 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.52□□□□□ -1.36
AMBRA1Q9C0C7 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AL627171.1-201ENST00000618845 1308 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 RNA5SP472-201ENST00000363868 119 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 RNA5SP172-201ENST00000365061 118 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ZNF37CP-201ENST00000406795 241 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 C21orf140-201ENST00000410005 756 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AL139135.1-201ENST00000412675 209 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 OR52N3P-201ENST00000413417 934 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 CENPN-204ENST00000428963 971 ntTSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC105052.2-201ENST00000434317 794 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 RPSAP7-201ENST00000456871 885 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 TREML3P-201ENST00000457327 501 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 SNORA81.1-201ENST00000458922 177 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ATP5G1P3-201ENST00000463301 410 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC008620.1-201ENST00000468453 592 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC096743.1-201ENST00000485172 319 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC074386.1-206ENST00000487102 761 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 RN7SL612P-201ENST00000497704 295 ntBASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.52□□□□□ -1.37
AMBRA1Q9C0C7 MRPS5P3-201ENST00000515577 166 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms