Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 RN7SKP221-201ENST00000410420 301 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 Z68868.1-201ENST00000429048 544 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 GTF2IP14-201ENST00000441415 586 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 RN7SL413P-201ENST00000482700 297 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 IGLV3-6-201ENST00000523937 250 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 RN7SL208P-201ENST00000577964 296 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC012175.1-201ENST00000603755 531 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC012368.3-201ENST00000604190 219 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 U1.41-201ENST00000617626 165 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC007603.3-201ENST00000636915 979 ntBASIC9.46□□□□□ -0.9
SIN3AQ96ST3 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
SIN3AQ96ST3 AC062022.1-201ENST00000451026 1684 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AC005034.3-201ENST00000604845 1747 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 VIM2P-201ENST00000402383 1294 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 RPL23AP85-201ENST00000421838 433 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 RPL7AP51-201ENST00000422016 760 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 CYCSP52-201ENST00000422857 310 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 FABP5P1-201ENST00000423401 411 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 FABP5P2-201ENST00000439042 408 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 COX4I1P2-201ENST00000447446 547 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 BTG1P1-201ENST00000540396 508 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AL445647.2-201ENST00000615170 130 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AC089999.3-201ENST00000622440 577 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 AL353743.3-201ENST00000442109 1468 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 CDY5P-201ENST00000411487 1580 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 CDY9P-201ENST00000451397 1580 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SAGE3P-201ENST00000619800 1635 ntBASIC9.45□□□□□ -0.9
SIN3AQ96ST3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
SIN3AQ96ST3 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 SNORA64.3-201ENST00000365647 134 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 RN7SKP281-201ENST00000410472 352 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 LINC00328-2P-201ENST00000436585 219 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC099670.1-201ENST00000455141 783 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 RPL24-206ENST00000495401 478 ntTSL 2 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 H3F3AP3-201ENST00000497682 407 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC019257.2-201ENST00000605539 497 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AC217777.1-201ENST00000570034 1471 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 AL359694.2-201ENST00000567753 1615 ntBASIC9.44□□□□□ -0.9
SIN3AQ96ST3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
SIN3AQ96ST3 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms