Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC007568.1-201ENST00000422912 471 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 EMC3-AS1-204ENST00000430621 683 ntTSL 2 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 WBP1LP1-201ENST00000460451 896 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC108751.3-201ENST00000461814 1020 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RN7SL508P-201ENST00000464472 303 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 SNORA58-201ENST00000505219 137 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC026782.2-201ENST00000510845 636 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC053513.1-201ENST00000543604 738 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 NXPE2P1-201ENST00000543705 726 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RN7SL786P-201ENST00000579130 298 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 RN7SL778P-201ENST00000607160 297 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC018690.1-201ENST00000608144 626 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC002094.5-201ENST00000623773 629 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AL353608.4-201ENST00000624487 1188 ntBASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AC104073.4-201ENST00000632111 598 ntTSL 2 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
AP1S3Q96PC3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC015969.1-201ENST00000366218 1416 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 FGG-204ENST00000405164 1539 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC239868.2-201ENST00000564237 4527 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC139426.3-201ENST00000605648 2059 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC007012.2-201ENST00000623206 1676 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AL356361.1-201ENST00000400943 1459 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 U3.1-201ENST00000362500 215 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 RPL23AP7-201ENST00000391616 738 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AL451046.1-201ENST00000406097 534 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 RPS17P17-201ENST00000419392 409 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 LMLN-AS1-201ENST00000423460 542 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC010878.1-201ENST00000456500 1047 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC236972.4-201ENST00000458091 963 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 ANKRD55-205ENST00000513241 626 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 OR5D2P-201ENST00000524390 911 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 RD3L-201ENST00000557640 1201 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC026458.1-201ENST00000564330 438 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AP001554.1-201ENST00000604533 376 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 uc_338.37-201ENST00000620113 186 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AL669830.1-201ENST00000621457 656 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC025287.2-201ENST00000621911 668 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 C18orf12-201ENST00000623329 537 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC016542.3-201ENST00000623520 619 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC090099.1-204ENST00000623626 849 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 AC073488.7-201ENST00000633785 778 ntBASIC4.97□□□□□ -1.61
AP1S3Q96PC3 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC4.97□□□□□ -1.61
AP1S3Q96PC3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms