Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC104109.1-201ENST00000498563 436 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC245052.7-201ENST00000601161 359 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC108865.2-201ENST00000606881 432 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC097641.3-201ENST00000613523 464 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 TEX41-255ENST00000626404 610 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 OFD1P17-201ENST00000437639 3018 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 OR5M2P-202ENST00000641241 4242 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 PSG10P-201ENST00000501199 1500 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 NAIP-201ENST00000194097 6088 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SYNE1Q8NF91 AC007993.1-201ENST00000621298 2430 ntBASIC2.06□□□□□ -2.08
SYNE1Q8NF91 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PARN-201ENST00000341484 2100 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC000089.1-201ENST00000424559 801 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 RN7SL413P-201ENST00000482700 297 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MTATP6P1-201ENST00000514057 681 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AP005902.2-201ENST00000518393 307 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 RGS5-220ENST00000528689 566 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC036111.2-201ENST00000533247 901 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 OLR1-209ENST00000543993 822 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 NDUFB9P1-201ENST00000604683 510 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC010325.3-201ENST00000641084 394 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC005332.9-201ENST00000620266 2921 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PPHLN1-202ENST00000317560 1359 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 RNA5SP198-201ENST00000410376 127 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AP002884.1-201ENST00000479691 655 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IGLVV-66-201ENST00000523818 341 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL031846.1-201ENST00000560933 314 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 MAPK10-383ENST00000642032 3390 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 RNA5SP321-201ENST00000362722 111 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 BX510359.3-201ENST00000422168 306 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC007383.1-201ENST00000445875 636 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC010878.1-201ENST00000456500 1047 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC084754.1-201ENST00000463466 464 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC008429.2-201ENST00000523057 864 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 AC004232.2-201ENST00000574245 821 ntBASIC2.05□□□□□ -2.08
SYNE1Q8NF91 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC2.05□□□□□ -2.08
SYNE1Q8NF91 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms