Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 RNA5SP321-201ENST00000362722 111 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 RNU1-24P-201ENST00000364285 165 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC121334.1-201ENST00000396414 802 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 CYCSP17-201ENST00000407870 315 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 MIR1204-201ENST00000408388 67 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC099535.1-201ENST00000408928 371 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC096632.2-201ENST00000438139 1239 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 NPM1P23-201ENST00000440193 849 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 GAPDHP37-201ENST00000442317 968 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC099670.1-201ENST00000455141 783 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC098818.1-201ENST00000478593 252 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC044810.1-201ENST00000480271 711 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC026826.1-201ENST00000493002 361 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC091849.1-201ENST00000509920 121 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC005519.1-201ENST00000554490 601 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AL445383.1-201ENST00000554689 874 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 GTF2IP6-201ENST00000583143 541 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 MIR212-201ENST00000586026 110 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 RAB28P4-201ENST00000622233 665 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC068213.1-201ENST00000625124 226 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC183089.2-201ENST00000637931 916 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC008560.1-201ENST00000510585 1766 ntAPPRIS P5 TSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC007406.5-201ENST00000570140 3170 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 AC079949.2-201ENST00000617117 2933 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 Z97989.1-201ENST00000531702 2421 ntBASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.25□□□□□ -1.41
H3F3CQ6NXT2 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 PABPC1P8-201ENST00000452851 2086 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ENO1P4-201ENST00000416471 1785 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 RPL12P13-201ENST00000310055 497 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 RNA5SP85-201ENST00000365378 119 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 RN7SKP38-201ENST00000410782 309 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 PAICSP2-201ENST00000429118 1150 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC011742.2-201ENST00000443818 352 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 RPL7AP23-201ENST00000482625 776 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 AC015524.1-201ENST00000491585 472 ntBASIC6.24□□□□□ -1.41
H3F3CQ6NXT2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms