Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC5.53□□□□□ -1.52
CX3CL1P78423 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AP003168.1-201ENST00000530091 307 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 FAM30C-201ENST00000561158 410 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AC010547.7-201ENST00000570323 333 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 RN7SL689P-201ENST00000577215 297 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CL1P78423 AC015818.6-201ENST00000584274 634 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CL1P78423 AC087575.1-201ENST00000585087 229 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 AC024085.1-201ENST00000604299 432 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 FXYD6P1-201ENST00000604857 285 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AC026951.2-201ENST00000613847 241 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AC012629.3-201ENST00000623397 328 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AC093909.6-201ENST00000624757 775 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 MIR665-201ENST00000635949 72 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 AP002800.1-201ENST00000624982 2225 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CX3CL1P78423 CDY5P-201ENST00000411487 1580 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 CDY9P-201ENST00000451397 1580 ntBASIC5.53□□□□□ -1.52
CX3CL1P78423 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CL1P78423 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CX3CL1P78423 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.53□□□□□ -1.52
CX3CL1P78423 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CX3CL1P78423 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 AL929601.4-201ENST00000613011 1341 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AL359195.2-201ENST00000623657 4412 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 EEF1A1P28-201ENST00000450915 1403 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CX3CL1P78423 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AL607077.1-201ENST00000401718 499 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 SNRPEP5-201ENST00000425442 278 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 RN7SL518P-201ENST00000491887 280 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 AL135933.1-201ENST00000498657 802 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 ACTR6P1-201ENST00000514311 1104 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 IGKV1D-32-201ENST00000517449 318 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC107952.1-201ENST00000524200 376 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 AP001007.2-201ENST00000525429 593 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.52□□□□□ -1.53
CX3CL1P78423 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 GTF2IP6-201ENST00000583143 541 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 NPM1P45-201ENST00000583151 559 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 SIGLEC31P-201ENST00000594237 551 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 AL353807.4-201ENST00000604995 257 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AC006213.5-201ENST00000619673 288 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 AP005212.3-201ENST00000619964 528 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 AC243725.1-201ENST00000637164 436 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CX3CL1P78423 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
CX3CL1P78423 AL022323.4-201ENST00000623980 13120 ntBASIC5.52□□□□□ -1.53
CX3CL1P78423 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.52□□□□□ -1.53
CX3CL1P78423 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms