Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC019185.3-201ENST00000438805 323 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC6.51□□□□□ -1.37
CDH13P55290 RN7SL654P-201ENST00000479178 292 ntBASIC6.51□□□□□ -1.37
CDH13P55290 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 AC021146.11-201ENST00000503319 491 ntBASIC6.51□□□□□ -1.37
CDH13P55290 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH13P55290 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 IGLV3-6-201ENST00000523937 250 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AC021820.1-201ENST00000525564 808 ntBASIC6.51□□□□□ -1.37
CDH13P55290 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CDH13P55290 AC069240.2-201ENST00000550242 609 ntBASIC6.51□□□□□ -1.37
CDH13P55290 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC6.51□□□□□ -1.37
CDH13P55290 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 MIR5682-201ENST00000584864 76 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.51□□□□□ -1.37
CDH13P55290 AL121782.1-201ENST00000611242 413 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AC106782.7-201ENST00000624024 418 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AC133555.5-201ENST00000624430 418 ntBASIC6.51□□□□□ -1.37
CDH13P55290 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH13P55290 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH13P55290 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 CASC19-228ENST00000641414 1684 ntBASIC6.51□□□□□ -1.37
CDH13P55290 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH13P55290 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.51□□□□□ -1.37
CDH13P55290 AP002833.3-201ENST00000625075 2265 ntBASIC6.51□□□□□ -1.37
CDH13P55290 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.51□□□□□ -1.37
CDH13P55290 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CDH13P55290 GOT2P1-201ENST00000440922 1309 ntBASIC6.5□□□□□ -1.37
CDH13P55290 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.5□□□□□ -1.37
CDH13P55290 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 OR2A3P-202ENST00000641249 1776 ntBASIC6.5□□□□□ -1.37
CDH13P55290 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH13P55290 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
CDH13P55290 RNA5SP474-201ENST00000391234 90 ntBASIC6.5□□□□□ -1.37
CDH13P55290 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 AL049697.3-201ENST00000406493 982 ntBASIC6.5□□□□□ -1.37
CDH13P55290 RPS21P8-201ENST00000413365 247 ntBASIC6.5□□□□□ -1.37
CDH13P55290 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH13P55290 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 MTND4LP12-201ENST00000448237 295 ntBASIC6.5□□□□□ -1.37
CDH13P55290 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH13P55290 ST13P21-201ENST00000453250 1098 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 RPS16P9-201ENST00000477220 427 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC074386.1-206ENST00000487102 761 ntBASIC6.5□□□□□ -1.37
CDH13P55290 H3F3AP3-201ENST00000497682 407 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC091917.2-201ENST00000505002 744 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH13P55290 OR52K3P-201ENST00000531655 943 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH13P55290 DCN-215ENST00000550099 719 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 AL109628.1-201ENST00000556877 366 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.5□□□□□ -1.37
CDH13P55290 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC6.5□□□□□ -1.37
CDH13P55290 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 MIR6726-201ENST00000613751 61 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC022960.2-201ENST00000616300 666 ntBASIC6.5□□□□□ -1.37
CDH13P55290 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CDH13P55290 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.5□□□□□ -1.37
CDH13P55290 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 MIPEPP2-201ENST00000422560 1819 ntBASIC6.5□□□□□ -1.37
CDH13P55290 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CDH13P55290 EEF1A1P28-201ENST00000450915 1403 ntBASIC6.5□□□□□ -1.37
CDH13P55290 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms