Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
SMARCA4P51532 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC11.43□□□□□ -0.58
SMARCA4P51532 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SMARCA4P51532 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC11.43□□□□□ -0.58
SMARCA4P51532 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SMARCA4P51532 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SMARCA4P51532 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMARCA4P51532 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC11.42□□□□□ -0.58
SMARCA4P51532 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AP000648.1-201ENST00000529682 397 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AL031601.1-201ENST00000605702 394 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 MIR7159-201ENST00000620587 66 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC11.42□□□□□ -0.58
SMARCA4P51532 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC11.42□□□□□ -0.58
SMARCA4P51532 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC11.42□□□□□ -0.58
SMARCA4P51532 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
SMARCA4P51532 CALN1-202ENST00000395275 9459 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
SMARCA4P51532 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AF287957.1-201ENST00000607368 1595 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMARCA4P51532 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMARCA4P51532 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMARCA4P51532 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AP006222.1-205ENST00000450734 457 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC11.42□□□□□ -0.58
SMARCA4P51532 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC11.42□□□□□ -0.58
SMARCA4P51532 RPL12P48-201ENST00000605620 304 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 MIR6793-201ENST00000612376 63 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 AC069234.4-201ENST00000621276 412 ntBASIC11.42□□□□□ -0.58
SMARCA4P51532 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SMARCA4P51532 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC11.41□□□□□ -0.58
SMARCA4P51532 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC11.41□□□□□ -0.58
SMARCA4P51532 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SMARCA4P51532 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMARCA4P51532 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMARCA4P51532 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
SMARCA4P51532 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
SMARCA4P51532 AC096537.2-201ENST00000413707 714 ntBASIC11.41□□□□□ -0.58
SMARCA4P51532 EEF1B2P8-201ENST00000414101 671 ntBASIC11.41□□□□□ -0.58
SMARCA4P51532 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMARCA4P51532 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC11.41□□□□□ -0.58
SMARCA4P51532 AP005119.1-201ENST00000580956 292 ntBASIC11.41□□□□□ -0.58
SMARCA4P51532 MRO-208ENST00000588444 866 ntTSL 3 BASIC11.41□□□□□ -0.58
SMARCA4P51532 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC11.41□□□□□ -0.58
SMARCA4P51532 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
SMARCA4P51532 MIR6798-201ENST00000612887 67 ntBASIC11.41□□□□□ -0.58
SMARCA4P51532 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
SMARCA4P51532 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
SMARCA4P51532 AC007993.1-201ENST00000621298 2430 ntBASIC11.41□□□□□ -0.58
SMARCA4P51532 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC11.41□□□□□ -0.58
SMARCA4P51532 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
SMARCA4P51532 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 PSG10P-201ENST00000501199 1500 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
SMARCA4P51532 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC11.4□□□□□ -0.58
SMARCA4P51532 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC11.4□□□□□ -0.58
SMARCA4P51532 RN7SL799P-201ENST00000475891 298 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC11.4□□□□□ -0.58
SMARCA4P51532 SNORA26.10-201ENST00000516427 141 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 IGHV3-57-201ENST00000520143 280 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC11.4□□□□□ -0.58
SMARCA4P51532 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC11.4□□□□□ -0.58
SMARCA4P51532 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC11.4□□□□□ -0.58
SMARCA4P51532 AC012653.2-201ENST00000621880 420 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 OXSM-209ENST00000626005 309 ntTSL 3 BASIC11.4□□□□□ -0.58
SMARCA4P51532 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SMARCA4P51532 Z99129.4-201ENST00000624649 2435 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 AC015871.3-201ENST00000618835 2261 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
SMARCA4P51532 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SMARCA4P51532 AC122713.2-201ENST00000624942 3335 ntBASIC11.4□□□□□ -0.58
SMARCA4P51532 AC023245.2-201ENST00000530760 2978 ntBASIC11.4□□□□□ -0.59
SMARCA4P51532 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
SMARCA4P51532 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC11.4□□□□□ -0.59
SMARCA4P51532 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SMARCA4P51532 RNU1-49P-201ENST00000363468 159 ntBASIC11.39□□□□□ -0.59
SMARCA4P51532 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC11.39□□□□□ -0.59
SMARCA4P51532 AL512637.1-201ENST00000439523 1231 ntBASIC11.39□□□□□ -0.59
SMARCA4P51532 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC11.39□□□□□ -0.59
SMARCA4P51532 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC11.39□□□□□ -0.59
SMARCA4P51532 GEMIN2P1-201ENST00000454246 752 ntBASIC11.39□□□□□ -0.59
SMARCA4P51532 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC11.39□□□□□ -0.59
SMARCA4P51532 EPPK1-201ENST00000568225 15530 ntAPPRIS ALT2 BASIC11.39□□□□□ -0.59
SMARCA4P51532 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SMARCA4P51532 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMARCA4P51532 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SMARCA4P51532 DYNC1I2P1-201ENST00000435916 1838 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms