Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RPS16P9-201ENST00000477220 427 ntBASIC5.93□□□□□ -1.46
SRP9P49458 AC105391.1-201ENST00000503155 1045 ntBASIC5.93□□□□□ -1.46
SRP9P49458 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.93□□□□□ -1.46
SRP9P49458 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.93□□□□□ -1.46
SRP9P49458 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 OR5D2P-201ENST00000524390 911 ntBASIC5.93□□□□□ -1.46
SRP9P49458 AP003080.1-202ENST00000526526 915 ntBASIC5.93□□□□□ -1.46
SRP9P49458 KCTD9P4-201ENST00000526766 1166 ntBASIC5.93□□□□□ -1.46
SRP9P49458 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC5.93□□□□□ -1.46
SRP9P49458 SSU72P6-201ENST00000532644 488 ntBASIC5.93□□□□□ -1.46
SRP9P49458 ASB8-207ENST00000536953 923 ntTSL 2 BASIC5.93□□□□□ -1.46
SRP9P49458 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.93□□□□□ -1.46
SRP9P49458 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.93□□□□□ -1.46
SRP9P49458 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.93□□□□□ -1.46
SRP9P49458 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC5.93□□□□□ -1.46
SRP9P49458 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 AP005212.3-201ENST00000619964 528 ntBASIC5.93□□□□□ -1.46
SRP9P49458 AC005753.1-201ENST00000623837 618 ntBASIC5.93□□□□□ -1.46
SRP9P49458 AC073263.3-201ENST00000624449 858 ntBASIC5.93□□□□□ -1.46
SRP9P49458 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.93□□□□□ -1.46
SRP9P49458 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 AC129502.1-201ENST00000623261 1654 ntBASIC5.93□□□□□ -1.46
SRP9P49458 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC5.93□□□□□ -1.46
SRP9P49458 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SRP9P49458 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC5.93□□□□□ -1.46
SRP9P49458 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
SRP9P49458 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SRP9P49458 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 RPL24P4-201ENST00000326586 421 ntBASIC5.92□□□□□ -1.46
SRP9P49458 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 RN7SKP188-201ENST00000410789 317 ntBASIC5.92□□□□□ -1.46
SRP9P49458 RN7SKP137-201ENST00000411074 307 ntBASIC5.92□□□□□ -1.46
SRP9P49458 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 MTND1P10-201ENST00000426108 832 ntBASIC5.92□□□□□ -1.46
SRP9P49458 AL590399.4-201ENST00000436561 601 ntBASIC5.92□□□□□ -1.46
SRP9P49458 LSM3P3-201ENST00000436601 306 ntBASIC5.92□□□□□ -1.46
SRP9P49458 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.92□□□□□ -1.46
SRP9P49458 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 AC005517.1-201ENST00000452091 489 ntBASIC5.92□□□□□ -1.46
SRP9P49458 EIF3LP2-201ENST00000457262 807 ntBASIC5.92□□□□□ -1.46
SRP9P49458 RN7SL492P-201ENST00000460700 295 ntBASIC5.92□□□□□ -1.46
SRP9P49458 RN7SL149P-201ENST00000465197 281 ntBASIC5.92□□□□□ -1.46
SRP9P49458 RPL7AP30-201ENST00000482859 796 ntBASIC5.92□□□□□ -1.46
SRP9P49458 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 AC007537.1-201ENST00000539347 327 ntBASIC5.92□□□□□ -1.46
SRP9P49458 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 WDR45BP1-201ENST00000583470 1029 ntBASIC5.92□□□□□ -1.46
SRP9P49458 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 Z93930.3-201ENST00000607919 749 ntBASIC5.92□□□□□ -1.46
SRP9P49458 Six3os1_1.1-201ENST00000620900 87 ntBASIC5.92□□□□□ -1.46
SRP9P49458 AC008626.2-201ENST00000624425 248 ntBASIC5.92□□□□□ -1.46
SRP9P49458 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.92□□□□□ -1.46
SRP9P49458 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 AC006511.3-201ENST00000624929 1783 ntBASIC5.92□□□□□ -1.46
SRP9P49458 AC006213.6-201ENST00000623722 4179 ntBASIC5.92□□□□□ -1.46
SRP9P49458 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 AL731556.1-201ENST00000394628 3711 ntBASIC5.92□□□□□ -1.46
SRP9P49458 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SRP9P49458 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SRP9P49458 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.92□□□□□ -1.46
SRP9P49458 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SRP9P49458 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SRP9P49458 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.91□□□□□ -1.46
SRP9P49458 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.91□□□□□ -1.46
SRP9P49458 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SRP9P49458 DOCK11P1-201ENST00000553480 5932 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms