Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.93□□□□□ -1.3
SLC1A1P43005 AC006213.6-201ENST00000623722 4179 ntBASIC6.93□□□□□ -1.3
SLC1A1P43005 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.93□□□□□ -1.3
SLC1A1P43005 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.93□□□□□ -1.3
SLC1A1P43005 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SLC1A1P43005 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 RN7SKP130-201ENST00000364924 301 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 AL359694.1-201ENST00000403247 604 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.92□□□□□ -1.3
SLC1A1P43005 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 FDPSP6-201ENST00000425091 512 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 AC097721.1-201ENST00000427150 1253 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 OR52U1P-201ENST00000439752 923 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 TVP23CP1-201ENST00000450317 639 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 ST13P21-201ENST00000453250 1098 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 RPSAP24-201ENST00000461543 873 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 RPL23AP64-201ENST00000469465 435 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 RPL17P2-201ENST00000491913 451 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 IGHV1-14-201ENST00000523391 241 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 HNRNPCP8-201ENST00000528764 888 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.92□□□□□ -1.3
SLC1A1P43005 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 AP001885.1-201ENST00000621658 558 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.92□□□□□ -1.3
SLC1A1P43005 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 NEK2P2-201ENST00000438441 1338 ntBASIC6.92□□□□□ -1.3
SLC1A1P43005 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC6.92□□□□□ -1.3
SLC1A1P43005 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SLC1A1P43005 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.91□□□□□ -1.3
SLC1A1P43005 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.91□□□□□ -1.3
SLC1A1P43005 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.91□□□□□ -1.3
SLC1A1P43005 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.91□□□□□ -1.3
SLC1A1P43005 RNA5SP321-201ENST00000362722 111 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 RNA5SP152-201ENST00000365184 110 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 MIR301B-201ENST00000390813 78 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 EEF1GP6-201ENST00000402309 905 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 MICG-208ENST00000416822 132 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AL359092.1-201ENST00000417156 265 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 FECHP1-201ENST00000431896 1214 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 CHCHD4P5-201ENST00000436684 427 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 RPL10P7-201ENST00000495649 625 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.91□□□□□ -1.3
SLC1A1P43005 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.91□□□□□ -1.3
SLC1A1P43005 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 AC007068.2-201ENST00000543168 395 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.91□□□□□ -1.3
SLC1A1P43005 RN7SL426P-201ENST00000579106 295 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AL031429.2-201ENST00000602605 649 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 AC091133.5-201ENST00000603088 301 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC6.91□□□□□ -1.3
SLC1A1P43005 AP001264.1-201ENST00000620602 703 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.91□□□□□ -1.3
SLC1A1P43005 QRSL1P3-201ENST00000552666 1316 ntBASIC6.91□□□□□ -1.3
SLC1A1P43005 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.91□□□□□ -1.3
SLC1A1P43005 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SLC1A1P43005 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms