Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.65□□□□□ -1.18
POLR2AP24928 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.65□□□□□ -1.18
POLR2AP24928 MIR4489-201ENST00000578869 62 ntBASIC7.65□□□□□ -1.18
POLR2AP24928 AC096708.4-201ENST00000620563 552 ntBASIC7.65□□□□□ -1.18
POLR2AP24928 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.65□□□□□ -1.18
POLR2AP24928 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
POLR2AP24928 NRP1-207ENST00000374875 5407 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
POLR2AP24928 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
POLR2AP24928 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
POLR2AP24928 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.65□□□□□ -1.19
POLR2AP24928 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.65□□□□□ -1.19
POLR2AP24928 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
POLR2AP24928 PALM2-AKAP2-201ENST00000302798 4718 ntTSL 2 BASIC7.65□□□□□ -1.19
POLR2AP24928 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.19
POLR2AP24928 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
POLR2AP24928 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 SEPT7P2-202ENST00000398921 823 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 RPL21P50-201ENST00000417698 477 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.64□□□□□ -1.19
POLR2AP24928 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.64□□□□□ -1.19
POLR2AP24928 AC074386.1-201ENST00000476560 767 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 RN7SL382P-201ENST00000482631 282 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 RPS10P20-201ENST00000494130 463 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC139272.1-201ENST00000505516 640 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC131392.1-201ENST00000506490 633 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 KHDC1P1-201ENST00000511053 508 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC7.64□□□□□ -1.19
POLR2AP24928 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 AC144521.1-201ENST00000607148 956 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AL021707.7-201ENST00000607991 416 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AL357153.4-201ENST00000620487 1016 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 CTAGE15-201ENST00000420911 2587 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
POLR2AP24928 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC7.64□□□□□ -1.19
POLR2AP24928 TLN2-211ENST00000636159 7441 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 AC015871.4-201ENST00000624650 2260 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 AL136984.1-201ENST00000607611 1893 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 MFSD8-218ENST00000641186 4448 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 MTCO1P25-201ENST00000414449 1799 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 LRRC8B-206ENST00000640258 8034 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 AL355433.1-201ENST00000422804 300 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC7.64□□□□□ -1.19
POLR2AP24928 HMGN1P36-201ENST00000446623 298 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 RN7SL799P-201ENST00000475891 298 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC7.64□□□□□ -1.19
POLR2AP24928 MTND2P31-201ENST00000512602 616 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.64□□□□□ -1.19
POLR2AP24928 RNA5SP362-201ENST00000516048 118 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.64□□□□□ -1.19
POLR2AP24928 AC008429.2-201ENST00000523057 864 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.64□□□□□ -1.19
POLR2AP24928 BNIP3P41-202ENST00000616656 861 ntBASIC7.64□□□□□ -1.19
POLR2AP24928 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.64□□□□□ -1.19
POLR2AP24928 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 LRRC37BP1-203ENST00000417404 4742 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
POLR2AP24928 PPWD1-214ENST00000535264 2195 ntTSL 2 BASIC7.64□□□□□ -1.19
POLR2AP24928 C18orf32-203ENST00000613385 5395 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
POLR2AP24928 AC008627.1-201ENST00000517511 1704 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC7.63□□□□□ -1.19
POLR2AP24928 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC7.63□□□□□ -1.19
POLR2AP24928 CYP2G2P-201ENST00000594920 1485 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 AP005139.1-201ENST00000580702 1647 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
POLR2AP24928 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
POLR2AP24928 RNFT1P3-201ENST00000340898 1052 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 AL096711.1-201ENST00000404780 554 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 DPPA2P3-201ENST00000411853 655 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 AL663061.1-201ENST00000416625 580 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.63□□□□□ -1.19
POLR2AP24928 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
POLR2AP24928 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC7.63□□□□□ -1.19
POLR2AP24928 AL133351.3-201ENST00000454998 193 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 AC135626.1-201ENST00000556983 435 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 AC026367.2-201ENST00000610630 553 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC7.63□□□□□ -1.19
POLR2AP24928 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.63□□□□□ -1.19
POLR2AP24928 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
POLR2AP24928 AL353743.3-201ENST00000442109 1468 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 AL353763.2-201ENST00000623489 1903 ntBASIC7.63□□□□□ -1.19
POLR2AP24928 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
POLR2AP24928 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms