Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SLC25A14P1-201ENST00000502867 901 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 RPL3P13-201ENST00000550415 216 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AP005901.4-201ENST00000577336 569 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC011921.2-201ENST00000589465 152 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AL391001.1-201ENST00000602747 715 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AL591926.1-201ENST00000620542 217 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC034229.6-201ENST00000623704 224 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC010325.3-201ENST00000641084 394 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.87□□□□□ -1.15
HLA-DOAP06340 AC093278.2-201ENST00000564956 2485 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 MTCO1P46-201ENST00000451639 1491 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 LINC01613-201ENST00000561476 2780 ntBASIC7.87□□□□□ -1.15
HLA-DOAP06340 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC007342.9-201ENST00000623877 1385 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 RNA5SP512-201ENST00000364550 120 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 RNU1-84P-201ENST00000365447 164 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 MORF4L1P5-201ENST00000433352 961 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 RSL24D1P2-201ENST00000445584 366 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 RN7SL39P-201ENST00000462264 297 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC005017.1-201ENST00000482002 490 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC106822.1-201ENST00000502647 526 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 RN7SKP70-201ENST00000516655 271 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC135983.3-201ENST00000528049 1226 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 FXNP1-201ENST00000555153 337 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC004232.1-201ENST00000571388 208 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 MIR4271-201ENST00000582451 67 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 AL589765.6-201ENST00000601909 549 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AL049840.5-201ENST00000602827 552 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AC144521.1-201ENST00000607148 956 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AP000577.1-201ENST00000624366 878 ntBASIC7.86□□□□□ -1.15
HLA-DOAP06340 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 TEX41-271ENST00000628213 993 ntTSL 5 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
HLA-DOAP06340 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HLA-DOAP06340 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AP003486.1-201ENST00000525716 3994 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC005839.1-201ENST00000624148 3213 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 TMC5-206ENST00000561503 2487 ntTSL 2 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC022507.1-201ENST00000548349 1505 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 CXADRP1-201ENST00000398098 1095 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 PGBD4P1-201ENST00000473644 407 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 OR7E22P-201ENST00000478335 1035 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC113367.2-201ENST00000505749 160 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC008429.2-201ENST00000523057 864 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC7.85□□□□□ -1.15
HLA-DOAP06340 OR52K3P-201ENST00000531655 943 ntBASIC7.85□□□□□ -1.15
HLA-DOAP06340 RPL41P2-201ENST00000544920 409 ntBASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms