Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.04□□□□□ -1.28
APOEP02649 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
APOEP02649 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.03□□□□□ -1.28
APOEP02649 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
APOEP02649 AL033543.1-201ENST00000623440 13454 ntBASIC7.03□□□□□ -1.28
APOEP02649 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 AC020658.2-201ENST00000559030 4020 ntBASIC7.03□□□□□ -1.28
APOEP02649 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 RNU1-55P-201ENST00000365510 158 ntBASIC7.03□□□□□ -1.28
APOEP02649 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
APOEP02649 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.03□□□□□ -1.28
APOEP02649 AP003385.1-201ENST00000426387 893 ntBASIC7.03□□□□□ -1.28
APOEP02649 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 CRYGGP-201ENST00000443337 145 ntBASIC7.03□□□□□ -1.28
APOEP02649 PFN1P11-201ENST00000445829 389 ntBASIC7.03□□□□□ -1.28
APOEP02649 NPM1P9-201ENST00000453156 844 ntBASIC7.03□□□□□ -1.28
APOEP02649 RPL31P11-202ENST00000454082 372 ntBASIC7.03□□□□□ -1.28
APOEP02649 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 RPL5P33-201ENST00000487833 905 ntBASIC7.03□□□□□ -1.28
APOEP02649 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 AC009567.2-201ENST00000502989 349 ntBASIC7.03□□□□□ -1.28
APOEP02649 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
APOEP02649 AC091849.1-201ENST00000509920 121 ntBASIC7.03□□□□□ -1.28
APOEP02649 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
APOEP02649 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.03□□□□□ -1.28
APOEP02649 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC7.03□□□□□ -1.28
APOEP02649 IGKV2OR2-7-201ENST00000604652 304 ntBASIC7.03□□□□□ -1.28
APOEP02649 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.03□□□□□ -1.28
APOEP02649 AC006328.2-201ENST00000623198 397 ntBASIC7.03□□□□□ -1.28
APOEP02649 AC012005.2-201ENST00000624333 397 ntBASIC7.03□□□□□ -1.28
APOEP02649 SNORA16A-202ENST00000628458 135 ntBASIC7.03□□□□□ -1.28
APOEP02649 AL354702.2-202ENST00000641481 890 ntBASIC7.03□□□□□ -1.28
APOEP02649 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
APOEP02649 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.28
APOEP02649 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
APOEP02649 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
APOEP02649 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
APOEP02649 UGT2B27P-201ENST00000505092 1620 ntBASIC7.02□□□□□ -1.29
APOEP02649 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
APOEP02649 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.02□□□□□ -1.29
APOEP02649 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
APOEP02649 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
APOEP02649 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
APOEP02649 AC092634.1-201ENST00000366505 199 ntBASIC7.02□□□□□ -1.29
APOEP02649 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.02□□□□□ -1.29
APOEP02649 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.02□□□□□ -1.29
APOEP02649 AC239367.3-201ENST00000428996 814 ntBASIC7.02□□□□□ -1.29
APOEP02649 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
APOEP02649 AC234771.4-201ENST00000441416 730 ntBASIC7.02□□□□□ -1.29
APOEP02649 E2F6P3-201ENST00000441743 743 ntBASIC7.02□□□□□ -1.29
APOEP02649 HMGN1P32-201ENST00000441744 256 ntBASIC7.02□□□□□ -1.29
APOEP02649 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC7.02□□□□□ -1.29
APOEP02649 RN7SL70P-201ENST00000478322 302 ntBASIC7.02□□□□□ -1.29
APOEP02649 RPL7AP23-201ENST00000482625 776 ntBASIC7.02□□□□□ -1.29
APOEP02649 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC7.02□□□□□ -1.29
APOEP02649 AC113191.1-201ENST00000517759 403 ntBASIC7.02□□□□□ -1.29
APOEP02649 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.02□□□□□ -1.29
APOEP02649 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.02□□□□□ -1.29
APOEP02649 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 AC027796.1-201ENST00000575593 512 ntBASIC7.02□□□□□ -1.29
APOEP02649 RN7SL270P-201ENST00000579643 281 ntBASIC7.02□□□□□ -1.29
APOEP02649 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC7.02□□□□□ -1.29
APOEP02649 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.02□□□□□ -1.29
APOEP02649 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
APOEP02649 AC073862.4-201ENST00000622982 854 ntBASIC7.02□□□□□ -1.29
APOEP02649 AC120057.5-201ENST00000623840 154 ntBASIC7.02□□□□□ -1.29
APOEP02649 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC7.02□□□□□ -1.29
APOEP02649 FO082842.1-201ENST00000423552 1370 ntBASIC7.02□□□□□ -1.29
APOEP02649 Z97989.1-201ENST00000531702 2421 ntBASIC7.02□□□□□ -1.29
APOEP02649 AC007998.4-201ENST00000612496 2533 ntBASIC7.02□□□□□ -1.29
APOEP02649 AP000866.6-201ENST00000638898 3579 ntBASIC7.02□□□□□ -1.29
APOEP02649 PABPC1P8-201ENST00000452851 2086 ntBASIC7.02□□□□□ -1.29
APOEP02649 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC7.01□□□□□ -1.29
APOEP02649 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC7.01□□□□□ -1.29
APOEP02649 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
APOEP02649 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms