Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 HNRNPCP2-201ENST00000399515 881 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AL121835.1-201ENST00000404250 354 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AL355862.1-201ENST00000412705 353 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AL390840.1-201ENST00000420303 988 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 MRPS21P2-201ENST00000424704 264 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 CYP2C56P-201ENST00000440076 291 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 HBG2-204ENST00000444587 307 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 RPL7P14-201ENST00000449851 741 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 VN1R38P-201ENST00000450265 887 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 CCNJP2-201ENST00000457810 1163 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 RN7SL815P-201ENST00000470970 290 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 SNRPCP3-201ENST00000474888 476 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 RN7SL549P-201ENST00000478997 282 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 OR7E163P-201ENST00000505943 894 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC091182.2-201ENST00000520431 578 ntTSL 4 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 RAP1B-230ENST00000543697 734 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 DCN-209ENST00000546745 1026 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC021755.3-201ENST00000560376 864 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC007255.2-201ENST00000604053 631 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC004241.2-201ENST00000614562 444 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC005899.7-201ENST00000618199 588 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 FGG-204ENST00000405164 1539 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.96□□□□□ -1.61
HLA-DQA1P01909 AC005725.1-201ENST00000577346 2607 ntBASIC4.96□□□□□ -1.61
HLA-DQA1P01909 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DQA1P01909 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DQA1P01909 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC4.96□□□□□ -1.61
HLA-DQA1P01909 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HLA-DQA1P01909 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 FOLH1B-202ENST00000529567 2145 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 OR5M2P-202ENST00000641241 4242 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC105235.1-201ENST00000623208 1816 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AL663061.1-201ENST00000416625 580 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC015987.1-201ENST00000419211 804 ntTSL 2 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 NPM1P30-201ENST00000425092 828 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 RPL6P2-201ENST00000425480 783 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 LINC01049-201ENST00000426840 742 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 Z68868.1-201ENST00000429048 544 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 RPSAP62-201ENST00000432596 833 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC000362.1-201ENST00000433725 425 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC009237.1-201ENST00000442127 744 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC079922.1-201ENST00000443291 359 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC108751.3-201ENST00000461814 1020 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 RN7SL849P-201ENST00000485236 295 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 RN7SL647P-201ENST00000485429 300 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC107956.2-201ENST00000496042 454 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 NPM1P27-201ENST00000502784 830 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC097486.1-201ENST00000515331 210 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC073916.1-201ENST00000545095 130 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC092720.1-203ENST00000563921 550 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DQA1P01909 BX005195.1-201ENST00000618097 1198 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AP000577.1-201ENST00000624366 878 ntBASIC4.96□□□□□ -1.62
HLA-DQA1P01909 AL121936.2-201ENST00000641935 662 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms