Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 AC013410.1-201ENST00000436223 1232 ntBASIC6.18□□□□□ -1.42
SSX4O60224 BMS1P11-201ENST00000442351 885 ntBASIC6.18□□□□□ -1.42
SSX4O60224 CYCSP44-201ENST00000448560 313 ntBASIC6.18□□□□□ -1.42
SSX4O60224 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 BZW1P1-201ENST00000454901 1240 ntBASIC6.18□□□□□ -1.42
SSX4O60224 BMS1P9-201ENST00000457640 885 ntBASIC6.18□□□□□ -1.42
SSX4O60224 RPS16P9-201ENST00000477220 427 ntBASIC6.18□□□□□ -1.42
SSX4O60224 MYL6P4-201ENST00000477911 453 ntBASIC6.18□□□□□ -1.42
SSX4O60224 EIF4E2P2-201ENST00000492033 736 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 AC131935.1-201ENST00000524621 333 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AP003555.2-201ENST00000528507 655 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 AP006587.5-201ENST00000532033 739 ntBASIC6.18□□□□□ -1.42
SSX4O60224 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
SSX4O60224 AC016144.1-201ENST00000548175 1087 ntBASIC6.18□□□□□ -1.42
SSX4O60224 CHEK2P2-201ENST00000554701 672 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX4O60224 AC068408.1-201ENST00000577406 1144 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AC100832.2-201ENST00000582080 776 ntBASIC6.18□□□□□ -1.42
SSX4O60224 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 STARD13-AS-240ENST00000609608 865 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 AL352984.2-201ENST00000611153 546 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 AP003789.1-201ENST00000617737 605 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AC012629.3-201ENST00000623397 328 ntBASIC6.18□□□□□ -1.42
SSX4O60224 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 AC026108.1-201ENST00000635444 547 ntBASIC6.18□□□□□ -1.42
SSX4O60224 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
SSX4O60224 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 NEK2P4-201ENST00000425793 1329 ntBASIC6.18□□□□□ -1.42
SSX4O60224 AL512310.3-201ENST00000547023 1335 ntBASIC6.18□□□□□ -1.42
SSX4O60224 MAPK10-357ENST00000641831 2858 ntBASIC6.18□□□□□ -1.42
SSX4O60224 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.18□□□□□ -1.42
SSX4O60224 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.18□□□□□ -1.42
SSX4O60224 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SSX4O60224 KARSP2-201ENST00000415696 1639 ntBASIC6.17□□□□□ -1.42
SSX4O60224 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC6.17□□□□□ -1.42
SSX4O60224 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX4O60224 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 AL358913.2-201ENST00000553881 1548 ntBASIC6.17□□□□□ -1.42
SSX4O60224 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 RNA5SP333-201ENST00000363466 118 ntBASIC6.17□□□□□ -1.42
SSX4O60224 RNA5SP334-201ENST00000364825 118 ntBASIC6.17□□□□□ -1.42
SSX4O60224 SNORA70.8-201ENST00000384231 136 ntBASIC6.17□□□□□ -1.42
SSX4O60224 ZNF736P10Y-201ENST00000403990 1110 ntBASIC6.17□□□□□ -1.42
SSX4O60224 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 AL136100.1-201ENST00000407696 330 ntBASIC6.17□□□□□ -1.42
SSX4O60224 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX4O60224 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX4O60224 AL627308.2-201ENST00000420014 432 ntBASIC6.17□□□□□ -1.42
SSX4O60224 DUTP4-201ENST00000424782 475 ntBASIC6.17□□□□□ -1.42
SSX4O60224 FDPSP1-201ENST00000424976 1071 ntBASIC6.17□□□□□ -1.42
SSX4O60224 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 AC013403.1-201ENST00000436954 263 ntBASIC6.17□□□□□ -1.42
SSX4O60224 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 SRP68P2-201ENST00000456184 254 ntBASIC6.17□□□□□ -1.42
SSX4O60224 RPL23P10-201ENST00000468780 412 ntBASIC6.17□□□□□ -1.42
SSX4O60224 RPS14P7-201ENST00000473701 448 ntBASIC6.17□□□□□ -1.42
SSX4O60224 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 CREM-242ENST00000490511 469 ntTSL 2 BASIC6.17□□□□□ -1.42
SSX4O60224 AC026826.1-201ENST00000493002 361 ntBASIC6.17□□□□□ -1.42
SSX4O60224 AL133372.1-201ENST00000493565 745 ntBASIC6.17□□□□□ -1.42
SSX4O60224 AC008417.1-201ENST00000510014 565 ntBASIC6.17□□□□□ -1.42
SSX4O60224 RNU6-551P-201ENST00000516661 103 ntBASIC6.17□□□□□ -1.42
SSX4O60224 RPL10P18-201ENST00000519384 309 ntBASIC6.17□□□□□ -1.42
SSX4O60224 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX4O60224 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 AC090971.3-201ENST00000557871 1041 ntBASIC6.17□□□□□ -1.42
SSX4O60224 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SSX4O60224 AC234775.3-201ENST00000564612 656 ntBASIC6.17□□□□□ -1.42
SSX4O60224 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.17□□□□□ -1.42
SSX4O60224 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC6.17□□□□□ -1.42
SSX4O60224 U91328.4-201ENST00000608919 517 ntBASIC6.17□□□□□ -1.42
SSX4O60224 AC097381.3-201ENST00000608962 462 ntBASIC6.17□□□□□ -1.42
SSX4O60224 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms