Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 FANCD2P2-201ENST00000437591 1400 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 RNA5SP308-201ENST00000362532 115 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 OOSP1-201ENST00000398992 1270 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AL121578.2-201ENST00000448797 447 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC099670.1-201ENST00000455141 783 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 NMNAT1P3-201ENST00000457517 888 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC096743.1-201ENST00000485172 319 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 GTF2IP6-201ENST00000583143 541 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 PRELID3BP3-201ENST00000584963 545 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC137695.1-201ENST00000604126 489 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC009779.8-202ENST00000607990 932 ntBASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NPIPA3F8WFD2 AC011379.1-201ENST00000508713 3025 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL034417.4-202ENST00000642135 2236 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RNU1-5P-201ENST00000362684 144 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RPL9P21-201ENST00000392269 505 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC019178.1-201ENST00000392337 440 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 SNORA11.5-201ENST00000408163 128 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RNU2-18P-201ENST00000411224 162 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 GAPDHP19-201ENST00000431768 1005 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 VN1R96P-201ENST00000446052 858 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 GAPDHP16-201ENST00000448152 962 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 OR52E7P-201ENST00000452394 933 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RPL5P12-201ENST00000477071 851 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RN7SL143P-201ENST00000496780 297 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 SNX18P23-201ENST00000510867 677 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC097103.2-205ENST00000515247 567 ntTSL 4 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 RN7SKP196-201ENST00000516267 345 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC087752.2-201ENST00000521219 281 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 OR9G2P-201ENST00000533326 880 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 SETP17-201ENST00000534163 817 ntBASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC6.17□□□□□ -1.42
NPIPA3F8WFD2 PPIAP14-201ENST00000577627 496 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms