Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 BMS1P3-201ENST00000372011 932 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SNORA9B-201ENST00000384170 133 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 VDAC2P1-201ENST00000399358 958 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 GAPDHP63-201ENST00000405405 1007 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RPL7AP72-201ENST00000417266 768 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL031282.1-204ENST00000418950 497 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC239367.3-201ENST00000428996 814 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 G6PC2-204ENST00000429379 645 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LINC00112-201ENST00000432830 522 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC004910.1-201ENST00000433493 787 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LSM3P3-201ENST00000436601 306 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL450263.2-201ENST00000439400 589 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 ATP6V1G1P3-201ENST00000442568 280 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AP000688.3-201ENST00000445464 348 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LIF-AS1-201ENST00000447565 808 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RHOQP2-201ENST00000449922 579 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 OR52I1-201ENST00000450052 1050 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC016700.3-201ENST00000455541 448 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL19P-201ENST00000462522 306 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 WWTR1-IT1-201ENST00000463167 451 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL541P-201ENST00000464317 283 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL333P-201ENST00000476398 297 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 TOMM22P4-201ENST00000511318 336 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 IGLV10-67-201ENST00000519446 325 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 IGKV2D-14-201ENST00000522473 355 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SSU72P6-201ENST00000532644 488 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 HNRNPA1P69-201ENST00000552536 933 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC109495.1-201ENST00000568026 551 ntTSL 4 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 RN7SL785P-201ENST00000578437 253 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC093484.4-201ENST00000583934 461 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF83-209ENST00000596930 560 ntTSL 4 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC239800.4-201ENST00000603712 296 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LAPTM4BP2-201ENST00000604542 446 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC025884.3-201ENST00000605422 343 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 IGKV1OR1-1-201ENST00000613775 347 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC074029.3-201ENST00000618623 312 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SMCR2_1.1-201ENST00000621493 157 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC022400.9-201ENST00000623633 273 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL358790.1-202ENST00000632794 583 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AL590396.3-201ENST00000636334 300 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 CARS-216ENST00000639317 135 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC000374.1-201ENST00000434698 1745 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 AC120338.1-201ENST00000625074 1541 ntBASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LINC01558Q9Y6Z2 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 Z95331.1-201ENST00000623075 23112 ntBASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC3.23□□□□□ -1.89
LINC01558Q9Y6Z2 PTGR1-201ENST00000309195 1223 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms