Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RPL12P13-201ENST00000310055 497 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RPL24P4-201ENST00000326586 421 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RNA5SP308-201ENST00000362532 115 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RNU1-5P-201ENST00000362684 144 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC245036.1-201ENST00000391727 309 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 LINC00328-2P-201ENST00000436585 219 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 PSMA6P2-201ENST00000457574 686 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RN7SL216P-201ENST00000471607 298 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RPS3AP49-201ENST00000472161 790 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RPL29P23-201ENST00000486188 442 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RN7SKP183-201ENST00000517169 324 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 OR9L1P-201ENST00000529493 933 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 NXPE2P1-201ENST00000543705 726 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 DIMT1P1-201ENST00000603970 763 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 MIR6823-201ENST00000622118 61 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC005514.1-201ENST00000623521 208 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC034229.6-201ENST00000623704 224 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC017037.4-201ENST00000624526 826 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 AC010132.4-201ENST00000569883 1368 ntBASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ERICH3-202ENST00000420661 2068 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.25□□□□□ -1.41
NPIPA1Q9UND3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AL391262.1-201ENST00000556558 1992 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RNU1-24P-201ENST00000364285 165 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 MIR640-201ENST00000385086 96 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RPL9P21-201ENST00000392269 505 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC019178.1-201ENST00000392337 440 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RPL7AP51-201ENST00000422016 760 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC245291.3-201ENST00000443400 292 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AL121578.2-201ENST00000448797 447 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RBMY2HP-201ENST00000457961 720 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RNA5SP318-201ENST00000516352 92 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 RNA5SP278-201ENST00000517055 102 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AP003033.2-201ENST00000528901 805 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 OR9G2P-201ENST00000533326 880 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC016144.1-201ENST00000548175 1087 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 GTF2IP6-201ENST00000583143 541 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 AC068213.1-201ENST00000625124 226 ntBASIC6.24□□□□□ -1.41
NPIPA1Q9UND3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms