Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 EXOC4-201ENST00000253861 4185 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 RN7SKP208-201ENST00000365474 361 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 RPL12P1-201ENST00000374520 498 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 HMGB3P1-201ENST00000393368 573 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 COX6A1P3-201ENST00000404167 293 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 HMGB3P18-201ENST00000406327 590 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 RPSAP44-201ENST00000406712 884 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 RPL7P34-201ENST00000433316 712 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 CACYBPP1-201ENST00000438592 684 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 MTND2P22-201ENST00000444325 1033 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 OR6K5P-201ENST00000447050 945 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AL050341.1-201ENST00000447743 313 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 OTX2P1-201ENST00000450956 354 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC005410.1-202ENST00000460347 485 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC115223.1-201ENST00000466377 870 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 RPL23AP37-201ENST00000479658 549 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 SNORA3.4-201ENST00000515969 96 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 RNU2-45P-201ENST00000516068 187 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 MTND6P19-201ENST00000519399 524 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 OR7E2P-201ENST00000533071 889 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC073896.2-202ENST00000549860 437 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 MIR4685-201ENST00000578185 69 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 KCNMA1-AS1-204ENST00000595702 504 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 Z98949.1-208ENST00000597614 816 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 INTS6-AS1-218ENST00000598905 906 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC013468.1-201ENST00000608680 598 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC010653.3-201ENST00000635332 232 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 TDRD12-201ENST00000421545 1317 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 TFDP2-212ENST00000486111 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC145138.1-201ENST00000512908 2851 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 MTND4P8-201ENST00000514997 1362 ntBASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.47□□□□□ -1.05
TRAIPQ9BWF2 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 MAPK10-354ENST00000641823 2732 ntBASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 AC036108.4-201ENST00000611654 2516 ntBASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
TRAIPQ9BWF2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 RNU6-185P-201ENST00000384421 107 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AC104297.1-201ENST00000393779 870 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 RN7SKP236-201ENST00000410635 284 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 RPS7P9-201ENST00000414704 586 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AC245047.5-201ENST00000437312 556 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AC108039.2-201ENST00000440214 359 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 GH2-204ENST00000456543 794 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AP001124.1-201ENST00000529628 385 ntBASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC8.46□□□□□ -1.06
TRAIPQ9BWF2 AC023050.2-201ENST00000544968 387 ntBASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms