Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 OR10D3-201ENST00000318666 1030 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 RNA5SP302-201ENST00000364896 100 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MTND2P12-201ENST00000417560 1252 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 GAPDHP57-201ENST00000424400 585 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AL645936.2-201ENST00000430565 928 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MTND3P4-201ENST00000453537 303 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MEF2AP1-201ENST00000454867 863 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL654P-201ENST00000479178 292 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MTCO1P55-201ENST00000489829 745 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC073648.3-201ENST00000504939 925 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 OSTC-204ENST00000512478 663 ntTSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 CARSP2-201ENST00000520688 277 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC011611.6-201ENST00000547483 255 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 PPIAP6-201ENST00000557078 499 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL42P-201ENST00000579786 294 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 RPS27AP19-201ENST00000597285 458 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC073539.3-201ENST00000601905 386 ntTSL 3 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC005229.3-201ENST00000603438 323 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AL049840.6-201ENST00000604583 345 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AL035410.2-201ENST00000604963 864 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AC025287.2-201ENST00000621911 668 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AP003108.4-201ENST00000623917 878 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 AP000720.1-201ENST00000625091 483 ntBASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
CDK5RAP3Q96JB5 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MTHFD1P1-201ENST00000413059 2764 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC241584.2-201ENST00000637142 2090 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AL136531.3-201ENST00000624378 3658 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC093278.2-201ENST00000564956 2485 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SKP189-201ENST00000365042 330 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC017035.1-201ENST00000411999 1115 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL390P-201ENST00000470634 284 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 RPL7AP30-201ENST00000482859 796 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 SNX18P23-201ENST00000510867 677 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 IGKV2D-38-201ENST00000518423 240 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MIR378C-201ENST00000578683 81 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 RN7SL426P-201ENST00000579106 295 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 CTSLP2-201ENST00000580501 394 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC245128.3-201ENST00000594721 748 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC010333.3-201ENST00000615100 402 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 MRPL57P3-201ENST00000619218 176 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 AC007204.1-201ENST00000621794 555 ntBASIC7.66□□□□□ -1.18
CDK5RAP3Q96JB5 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms