Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC8.01□□□□□ -1.13
RHBDL3P58872 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RHBDL3P58872 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
RHBDL3P58872 AC068733.2-201ENST00000605434 1418 ntBASIC8.01□□□□□ -1.13
RHBDL3P58872 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
RHBDL3P58872 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
RHBDL3P58872 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC8.01□□□□□ -1.13
RHBDL3P58872 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RHBDL3P58872 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC8.01□□□□□ -1.13
RHBDL3P58872 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
RHBDL3P58872 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC8.01□□□□□ -1.13
RHBDL3P58872 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC8.01□□□□□ -1.13
RHBDL3P58872 ZNF33A-204ENST00000458705 6084 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC8□□□□□ -1.13
RHBDL3P58872 RNA5SP512-201ENST00000364550 120 ntBASIC8□□□□□ -1.13
RHBDL3P58872 TINAG-202ENST00000370864 692 ntTSL 2 BASIC8□□□□□ -1.13
RHBDL3P58872 RPS21P8-201ENST00000413365 247 ntBASIC8□□□□□ -1.13
RHBDL3P58872 AL359885.1-201ENST00000415786 903 ntBASIC8□□□□□ -1.13
RHBDL3P58872 PSMC1P2-201ENST00000423961 1204 ntBASIC8□□□□□ -1.13
RHBDL3P58872 GAPDHP34-201ENST00000432112 823 ntBASIC8□□□□□ -1.13
RHBDL3P58872 TIMM8BP2-201ENST00000445940 251 ntBASIC8□□□□□ -1.13
RHBDL3P58872 AC097359.1-201ENST00000447946 463 ntBASIC8□□□□□ -1.13
RHBDL3P58872 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 AC019084.1-201ENST00000457337 432 ntBASIC8□□□□□ -1.13
RHBDL3P58872 OR7E22P-201ENST00000478335 1035 ntBASIC8□□□□□ -1.13
RHBDL3P58872 RPL37P23-201ENST00000492641 294 ntBASIC8□□□□□ -1.13
RHBDL3P58872 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC8□□□□□ -1.13
RHBDL3P58872 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 AC147055.1-201ENST00000509261 750 ntBASIC8□□□□□ -1.13
RHBDL3P58872 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8□□□□□ -1.13
RHBDL3P58872 AL591767.3-201ENST00000554632 525 ntBASIC8□□□□□ -1.13
RHBDL3P58872 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 AC079791.1-201ENST00000605356 973 ntBASIC8□□□□□ -1.13
RHBDL3P58872 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
RHBDL3P58872 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8□□□□□ -1.13
RHBDL3P58872 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8□□□□□ -1.13
RHBDL3P58872 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC8□□□□□ -1.13
RHBDL3P58872 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8□□□□□ -1.13
RHBDL3P58872 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
RHBDL3P58872 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 DYNC1I2P1-201ENST00000435916 1838 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.99□□□□□ -1.13
RHBDL3P58872 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 XIST-201ENST00000416330 750 ntTSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC239367.3-201ENST00000428996 814 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 AL020997.1-201ENST00000446554 349 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 HMGN1P16-201ENST00000508308 283 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 LECT2-203ENST00000512872 762 ntTSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.99□□□□□ -1.13
RHBDL3P58872 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AP004607.6-201ENST00000525033 1202 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC009729.1-201ENST00000548873 1133 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 AL049874.4-201ENST00000557593 255 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
RHBDL3P58872 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AL589765.6-201ENST00000601909 549 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 VN1R81P-201ENST00000602085 372 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.99□□□□□ -1.13
RHBDL3P58872 AL591926.1-201ENST00000620542 217 ntBASIC7.99□□□□□ -1.13
RHBDL3P58872 MTCO1P1-201ENST00000624263 1081 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms