Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 COL5A2-201ENST00000374866 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 CLTCL1-211ENST00000621271 5313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
HTTP42858 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 RNA5SP507-201ENST00000363603 121 ntBASIC6.92□□□□□ -1.3
HTTP42858 RPS27P18-201ENST00000431701 247 ntBASIC6.92□□□□□ -1.3
HTTP42858 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 AC096996.1-201ENST00000563813 325 ntBASIC6.92□□□□□ -1.3
HTTP42858 TRAF5-202ENST00000336184 3972 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 ANGPT4-201ENST00000381922 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 AL807761.1-201ENST00000417622 171 ntBASIC6.92□□□□□ -1.3
HTTP42858 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 HIGD1AP14-201ENST00000507617 282 ntBASIC6.92□□□□□ -1.3
HTTP42858 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 AP001784.1-201ENST00000624107 428 ntBASIC6.92□□□□□ -1.3
HTTP42858 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 JCAD-201ENST00000375377 9265 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 AL161912.4-201ENST00000623889 2468 ntBASIC6.92□□□□□ -1.3
HTTP42858 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 RPL5P5-201ENST00000392009 893 ntBASIC6.92□□□□□ -1.3
HTTP42858 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 RPL5P9-201ENST00000448118 886 ntBASIC6.92□□□□□ -1.3
HTTP42858 RN7SL72P-201ENST00000460697 269 ntBASIC6.92□□□□□ -1.3
HTTP42858 RPL7AP6-201ENST00000477943 801 ntBASIC6.92□□□□□ -1.3
HTTP42858 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 OR9L1P-201ENST00000529493 933 ntBASIC6.92□□□□□ -1.3
HTTP42858 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.92□□□□□ -1.3
HTTP42858 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC6.92□□□□□ -1.3
HTTP42858 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
HTTP42858 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
HTTP42858 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC6.91□□□□□ -1.3
HTTP42858 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 SUPT6H-202ENST00000347486 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 SELENOWP1-201ENST00000322792 252 ntBASIC6.91□□□□□ -1.3
HTTP42858 RN7SKP77-201ENST00000363261 353 ntBASIC6.91□□□□□ -1.3
HTTP42858 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.91□□□□□ -1.3
HTTP42858 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.91□□□□□ -1.3
HTTP42858 PCNAP4-201ENST00000532690 730 ntBASIC6.91□□□□□ -1.3
HTTP42858 HAUS8P1-201ENST00000549005 542 ntBASIC6.91□□□□□ -1.3
HTTP42858 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.91□□□□□ -1.3
HTTP42858 NIPAL3-201ENST00000003912 5481 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.91□□□□□ -1.3
HTTP42858 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.91□□□□□ -1.3
HTTP42858 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 AC023421.1-201ENST00000590535 1785 ntBASIC6.91□□□□□ -1.3
HTTP42858 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.91□□□□□ -1.3
HTTP42858 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.91□□□□□ -1.3
HTTP42858 VN1R54P-201ENST00000435210 1049 ntBASIC6.91□□□□□ -1.3
HTTP42858 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.91□□□□□ -1.3
HTTP42858 OR7E116P-201ENST00000448529 957 ntBASIC6.91□□□□□ -1.3
HTTP42858 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
HTTP42858 IGLV2-34-201ENST00000490007 283 ntBASIC6.91□□□□□ -1.3
HTTP42858 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.91□□□□□ -1.3
HTTP42858 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.91□□□□□ -1.3
HTTP42858 ARMC9-214ENST00000611582 5759 ntTSL 5 BASIC6.91□□□□□ -1.3
HTTP42858 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC6.91□□□□□ -1.3
HTTP42858 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
HTTP42858 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
HTTP42858 BHLHB9-202ENST00000372735 5130 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
HTTP42858 AL592429.1-201ENST00000403909 1473 ntBASIC6.91□□□□□ -1.3
HTTP42858 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.9□□□□□ -1.3
HTTP42858 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.9□□□□□ -1.3
HTTP42858 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.9□□□□□ -1.3
HTTP42858 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HTTP42858 TNPO1P1-201ENST00000423641 1138 ntBASIC6.9□□□□□ -1.3
HTTP42858 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.9□□□□□ -1.3
HTTP42858 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC6.9□□□□□ -1.3
HTTP42858 AL606490.1-201ENST00000452266 765 ntBASIC6.9□□□□□ -1.3
HTTP42858 RN7SL172P-201ENST00000460535 303 ntBASIC6.9□□□□□ -1.3
HTTP42858 AL122020.1-201ENST00000472287 459 ntBASIC6.9□□□□□ -1.3
HTTP42858 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC6.9□□□□□ -1.3
HTTP42858 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.9□□□□□ -1.3
HTTP42858 AC010333.3-201ENST00000615100 402 ntBASIC6.9□□□□□ -1.3
HTTP42858 AC005840.5-201ENST00000619166 599 ntBASIC6.9□□□□□ -1.3
HTTP42858 CASC19-264ENST00000641912 1184 ntBASIC6.9□□□□□ -1.3
HTTP42858 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HTTP42858 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms