Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.13□□□□□ -1.43
SHC1P29353 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 RN7SL372P-201ENST00000461982 298 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC022730.1-201ENST00000473114 568 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC074386.1-206ENST00000487102 761 ntBASIC6.13□□□□□ -1.43
SHC1P29353 RPL23AP80-201ENST00000495605 424 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC137549.1-201ENST00000514243 533 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.13□□□□□ -1.43
SHC1P29353 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.13□□□□□ -1.43
SHC1P29353 AC092375.1-201ENST00000550410 637 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.13□□□□□ -1.43
SHC1P29353 MIR4301-201ENST00000577203 66 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AL590032.1-201ENST00000604920 252 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.13□□□□□ -1.43
SHC1P29353 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.13□□□□□ -1.43
SHC1P29353 AL137000.1-201ENST00000610528 1244 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC007671.1-201ENST00000616957 830 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC006328.2-201ENST00000623198 397 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC012005.2-201ENST00000624333 397 ntBASIC6.13□□□□□ -1.43
SHC1P29353 AC027559.1-201ENST00000636288 271 ntBASIC6.13□□□□□ -1.43
SHC1P29353 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC6.13□□□□□ -1.43
SHC1P29353 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.13□□□□□ -1.43
SHC1P29353 LCOR-201ENST00000286067 4542 ntBASIC6.13□□□□□ -1.43
SHC1P29353 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.13□□□□□ -1.43
SHC1P29353 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.13□□□□□ -1.43
SHC1P29353 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SHC1P29353 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
SHC1P29353 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 RNA5SP333-201ENST00000363466 118 ntBASIC6.12□□□□□ -1.43
SHC1P29353 RN7SKP118-201ENST00000364331 330 ntBASIC6.12□□□□□ -1.43
SHC1P29353 RNA5SP334-201ENST00000364825 118 ntBASIC6.12□□□□□ -1.43
SHC1P29353 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.12□□□□□ -1.43
SHC1P29353 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 AL713922.1-201ENST00000416477 747 ntBASIC6.12□□□□□ -1.43
SHC1P29353 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.12□□□□□ -1.43
SHC1P29353 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.12□□□□□ -1.43
SHC1P29353 EIF4A1P5-201ENST00000428062 1095 ntBASIC6.12□□□□□ -1.43
SHC1P29353 RPL3P11-201ENST00000434028 1146 ntBASIC6.12□□□□□ -1.43
SHC1P29353 ZNF806-201ENST00000438300 1774 ntBASIC6.12□□□□□ -1.43
SHC1P29353 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.12□□□□□ -1.43
SHC1P29353 CDY3P-201ENST00000454543 1618 ntBASIC6.12□□□□□ -1.43
SHC1P29353 AC063955.1-201ENST00000462872 685 ntBASIC6.12□□□□□ -1.43
SHC1P29353 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC6.12□□□□□ -1.43
SHC1P29353 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.12□□□□□ -1.43
SHC1P29353 KATNBL1P4-201ENST00000503545 918 ntBASIC6.12□□□□□ -1.43
SHC1P29353 AC007106.1-201ENST00000509666 600 ntTSL 4 BASIC6.12□□□□□ -1.43
SHC1P29353 SNX18P23-201ENST00000510867 677 ntBASIC6.12□□□□□ -1.43
SHC1P29353 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.12□□□□□ -1.43
SHC1P29353 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 AC013488.1-201ENST00000526618 1838 ntBASIC6.12□□□□□ -1.43
SHC1P29353 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC6.12□□□□□ -1.43
SHC1P29353 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC6.12□□□□□ -1.43
SHC1P29353 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.12□□□□□ -1.43
SHC1P29353 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.12□□□□□ -1.43
SHC1P29353 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.12□□□□□ -1.43
SHC1P29353 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 AC012065.3-201ENST00000602736 439 ntBASIC6.12□□□□□ -1.43
SHC1P29353 AL591222.2-201ENST00000604443 754 ntBASIC6.12□□□□□ -1.43
SHC1P29353 MIR6849-201ENST00000618543 69 ntBASIC6.12□□□□□ -1.43
SHC1P29353 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 AC120057.5-201ENST00000623840 154 ntBASIC6.12□□□□□ -1.43
SHC1P29353 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
SHC1P29353 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SHC1P29353 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SHC1P29353 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.12□□□□□ -1.43
SHC1P29353 ABCA11P-202ENST00000504019 2110 ntBASIC6.11□□□□□ -1.43
SHC1P29353 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHC1P29353 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHC1P29353 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.11□□□□□ -1.43
SHC1P29353 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SHC1P29353 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHC1P29353 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.11□□□□□ -1.43
SHC1P29353 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SHC1P29353 AC007114.2-201ENST00000576014 4281 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms