Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
RB1P06400 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC7.21□□□□□ -1.26
RB1P06400 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.21□□□□□ -1.26
RB1P06400 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.21□□□□□ -1.26
RB1P06400 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC7.21□□□□□ -1.26
RB1P06400 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
RB1P06400 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
RB1P06400 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
RB1P06400 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.2□□□□□ -1.26
RB1P06400 U3.52-201ENST00000384034 216 ntBASIC7.2□□□□□ -1.26
RB1P06400 MIR188-201ENST00000385034 86 ntBASIC7.2□□□□□ -1.26
RB1P06400 AC005522.1-201ENST00000395416 346 ntBASIC7.2□□□□□ -1.26
RB1P06400 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
RB1P06400 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 AL020997.1-201ENST00000446554 349 ntBASIC7.2□□□□□ -1.26
RB1P06400 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.2□□□□□ -1.26
RB1P06400 RN7SL187P-201ENST00000495587 303 ntBASIC7.2□□□□□ -1.26
RB1P06400 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 AC009879.1-201ENST00000520029 839 ntBASIC7.2□□□□□ -1.26
RB1P06400 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 AC013283.1-201ENST00000557282 492 ntBASIC7.2□□□□□ -1.26
RB1P06400 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC7.2□□□□□ -1.26
RB1P06400 AL365223.1-201ENST00000574864 1297 ntBASIC7.2□□□□□ -1.26
RB1P06400 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.2□□□□□ -1.26
RB1P06400 AC245052.7-201ENST00000601161 359 ntBASIC7.2□□□□□ -1.26
RB1P06400 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.2□□□□□ -1.26
RB1P06400 IPO5-229ENST00000631030 192 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 AC008691.1-209ENST00000642094 814 ntBASIC7.2□□□□□ -1.26
RB1P06400 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
RB1P06400 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 AL121949.2-201ENST00000403446 1548 ntBASIC7.2□□□□□ -1.26
RB1P06400 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 RSRC1-203ENST00000464171 2411 ntTSL 5 BASIC7.2□□□□□ -1.26
RB1P06400 AL117339.4-201ENST00000608335 7063 ntBASIC7.2□□□□□ -1.26
RB1P06400 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RB1P06400 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RB1P06400 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RB1P06400 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RB1P06400 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
RB1P06400 AL590762.1-201ENST00000391782 432 ntBASIC7.19□□□□□ -1.26
RB1P06400 RPL5P5-201ENST00000392009 893 ntBASIC7.19□□□□□ -1.26
RB1P06400 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RB1P06400 AL354794.2-201ENST00000424795 1248 ntBASIC7.19□□□□□ -1.26
RB1P06400 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 RPL5P34-201ENST00000426545 891 ntBASIC7.19□□□□□ -1.26
RB1P06400 FTH1P10-202ENST00000430907 550 ntBASIC7.19□□□□□ -1.26
RB1P06400 PGM5P3-AS1-202ENST00000442069 615 ntTSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 RPL5P7-201ENST00000444235 813 ntBASIC7.19□□□□□ -1.26
RB1P06400 RPL5P9-201ENST00000448118 886 ntBASIC7.19□□□□□ -1.26
RB1P06400 RN7SL254P-201ENST00000460609 284 ntBASIC7.19□□□□□ -1.26
RB1P06400 GLRXP3-201ENST00000470810 321 ntBASIC7.19□□□□□ -1.26
RB1P06400 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.19□□□□□ -1.26
RB1P06400 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.19□□□□□ -1.26
RB1P06400 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC7.19□□□□□ -1.26
RB1P06400 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.19□□□□□ -1.26
RB1P06400 OR52H2P-201ENST00000514607 902 ntBASIC7.19□□□□□ -1.26
RB1P06400 NATP-201ENST00000523491 878 ntBASIC7.19□□□□□ -1.26
RB1P06400 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.19□□□□□ -1.26
RB1P06400 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC7.19□□□□□ -1.26
RB1P06400 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RB1P06400 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC7.19□□□□□ -1.26
RB1P06400 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.19□□□□□ -1.26
RB1P06400 AC026898.1-201ENST00000586404 571 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms