Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 MIR5192-201ENST00000579892 92 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 ZNF675-202ENST00000596211 581 ntTSL 4 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 FAM228B-205ENST00000611127 975 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 C18orf12-201ENST00000623329 537 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC018628.1-201ENST00000624147 3819 ntBASIC4.99□□□□□ -1.61
HLA-DQA1P01909 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HLA-DQA1P01909 AC083837.1-201ENST00000565297 2994 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AL359976.1-201ENST00000418655 3528 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 PHF5A-201ENST00000216252 1086 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RNA5SP472-201ENST00000363868 119 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 SNORA51.7-201ENST00000384171 134 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 SNORD15A-201ENST00000384214 148 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RN7SKP17-201ENST00000411242 351 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LINC01392-201ENST00000419883 565 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 NME1P1-201ENST00000420914 382 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 PPIL1P1-201ENST00000423936 499 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RPSAP49-201ENST00000445182 886 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 UBE2V2P4-201ENST00000447495 259 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RN7SL58P-201ENST00000473445 294 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RPL7AP56-201ENST00000476420 791 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RPL23AP8-201ENST00000479812 475 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RN7SL338P-201ENST00000481467 293 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AC008417.1-201ENST00000510014 565 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LINC00967-204ENST00000518412 271 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 PHBP2-201ENST00000532859 806 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 NPM1P5-201ENST00000557228 838 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AC027020.1-202ENST00000557839 429 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 OR4F28P-201ENST00000559128 938 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 RPS7P1-201ENST00000571702 585 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 OR4F8P-201ENST00000589943 937 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 AC243830.2-201ENST00000618067 630 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 Six3os1_1.1-201ENST00000620900 87 ntBASIC4.98□□□□□ -1.61
HLA-DQA1P01909 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HLA-DQA1P01909 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 DDX50P1-201ENST00000438163 2400 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 CASC19-228ENST00000641414 1684 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 RNA5SP448-201ENST00000363151 111 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 Y_RNA.209-201ENST00000364156 111 ntBASIC4.97□□□□□ -1.61
HLA-DQA1P01909 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HLA-DQA1P01909 SNORA70.8-201ENST00000384231 136 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 161.3 ms