Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RNA5SP308-201ENST00000362532 115 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 RNA5SP65-201ENST00000363166 119 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 RN7SKP205-201ENST00000410999 307 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 MTND2P11-201ENST00000423638 648 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AL589794.1-201ENST00000424971 390 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC6.09□□□□□ -1.43
ZIC3O60481 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 RPL26P30-201ENST00000453533 435 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 MTND3P4-201ENST00000453537 303 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AK5-208ENST00000478255 556 ntTSL 2 BASIC6.09□□□□□ -1.43
ZIC3O60481 RWDD4P1-201ENST00000488019 565 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 MRPL57P6-201ENST00000506570 309 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC139713.1-202ENST00000512366 460 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 OR52H2P-201ENST00000514607 902 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.09□□□□□ -1.43
ZIC3O60481 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC091304.4-201ENST00000565703 620 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AC023389.2-201ENST00000580031 955 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AC036176.3-201ENST00000602456 418 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AC091133.5-201ENST00000603088 301 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 MIR6885-201ENST00000612241 66 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC010333.3-201ENST00000615100 402 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 AL109620.1-201ENST00000618738 1197 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 AL354702.2-202ENST00000641481 890 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC079949.2-201ENST00000617117 2933 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 TATDN2P3-201ENST00000452855 3665 ntBASIC6.09□□□□□ -1.43
ZIC3O60481 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.09□□□□□ -1.43
ZIC3O60481 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
ZIC3O60481 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.09□□□□□ -1.43
ZIC3O60481 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ZIC3O60481 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.09□□□□□ -1.43
ZIC3O60481 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ZIC3O60481 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.09□□□□□ -1.44
ZIC3O60481 AC009812.3-201ENST00000523871 3766 ntTSL 4 BASIC6.09□□□□□ -1.44
ZIC3O60481 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.09□□□□□ -1.44
ZIC3O60481 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
ZIC3O60481 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
ZIC3O60481 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
ZIC3O60481 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 EPS15P1-202ENST00000459691 2071 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.08□□□□□ -1.44
ZIC3O60481 CTAGE11P-201ENST00000451540 2353 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC6.08□□□□□ -1.44
ZIC3O60481 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ZIC3O60481 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 AC010894.1-201ENST00000313760 361 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
ZIC3O60481 RNA5SP321-201ENST00000362722 111 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 RNA5SP140-201ENST00000364524 92 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 AC019178.1-201ENST00000392337 440 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 AL359694.1-201ENST00000403247 604 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 RNA5SP155-201ENST00000411154 129 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.08□□□□□ -1.44
ZIC3O60481 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 TRGV7-201ENST00000427089 353 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC6.08□□□□□ -1.44
ZIC3O60481 AC091390.2-201ENST00000432573 374 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 PA2G4P1-201ENST00000442248 1197 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.08□□□□□ -1.44
ZIC3O60481 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.08□□□□□ -1.44
ZIC3O60481 AC073476.1-201ENST00000452854 407 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.08□□□□□ -1.44
ZIC3O60481 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZIC3O60481 AC099340.1-201ENST00000475247 599 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 MORF4L2P1-201ENST00000503761 858 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 AC114324.2-202ENST00000503812 134 ntBASIC6.08□□□□□ -1.44
ZIC3O60481 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.08□□□□□ -1.44
ZIC3O60481 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.08□□□□□ -1.44
ZIC3O60481 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms