Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 MIR614-201ENST00000385082 90 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL050335.1-201ENST00000396909 869 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL359715.1-201ENST00000404330 555 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 TMA16P2-201ENST00000413187 601 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL663061.1-201ENST00000416625 580 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 VDAC1P10-201ENST00000416715 891 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 RPL34P27-201ENST00000428810 349 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC000362.1-201ENST00000433725 425 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC007879.2-201ENST00000454444 551 ntTSL 4 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 MEF2AP1-201ENST00000454867 863 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 RPLP0P1-201ENST00000457002 361 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CCNJP2-201ENST00000457810 1163 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC091982.1-202ENST00000473923 343 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 RN7SL338P-201ENST00000481467 293 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 RN7SL608P-201ENST00000492377 279 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC021733.2-201ENST00000518830 497 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 UBE2CP4-201ENST00000561405 535 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AP003115.1-201ENST00000569849 463 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 LRRC75A-AS1-220ENST00000579473 585 ntTSL 4 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC011921.2-201ENST00000589465 152 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL139041.1-201ENST00000605480 610 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC113361.1-201ENST00000606683 543 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CT45A10-201ENST00000611668 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 FAM74A6-203ENST00000615956 481 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC073488.7-201ENST00000633785 778 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 JAML-213ENST00000640745 951 ntTSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL731532.1-201ENST00000623972 4236 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AL512329.1-201ENST00000404600 1592 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC011369.2-201ENST00000624423 1567 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 AC010624.4-201ENST00000597606 1351 ntBASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RCL1Q9Y2P8 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 RNU1-21P-201ENST00000363327 163 ntBASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 OR4F7P-201ENST00000402444 931 ntBASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 OR4F1P-201ENST00000405102 938 ntBASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 OR2W4P-201ENST00000406496 926 ntBASIC5.4□□□□□ -1.54
RCL1Q9Y2P8 AL023284.3-201ENST00000407767 334 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms