Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 AC245452.2-201ENST00000435222 392 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 NSRP1-205ENST00000479218 540 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 RNA5SP518-201ENST00000515957 119 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AP003084.1-201ENST00000524828 742 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 NDUFA3P2-201ENST00000531434 232 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC079866.1-201ENST00000534985 1220 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 FRG2IP-201ENST00000563581 781 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AP006587.6-201ENST00000582128 1091 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC113361.1-201ENST00000606683 543 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR6736-201ENST00000616799 59 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC025287.2-201ENST00000621911 668 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 AL139254.2-202ENST00000641937 1156 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 TUBBP10-201ENST00000427668 1301 ntBASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCNB1IP1Q9NPC3 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 ZNF710-AS1-202ENST00000620791 2133 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 C6orf106-201ENST00000374021 916 ntAPPRIS ALT2 TSL 3 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC121334.1-201ENST00000396414 802 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 RNA5SP177-201ENST00000410122 107 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 VDAC1P10-201ENST00000416715 891 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AK3P5-201ENST00000432033 519 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 DNAJC19P5-201ENST00000443295 316 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 MGAT2P1-201ENST00000449718 797 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 SULT1D1P-201ENST00000458020 882 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 BX323845.2-201ENST00000458382 234 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 RPS26P11-201ENST00000463445 348 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 SCARNA6-201ENST00000515982 265 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AP003080.1-202ENST00000526526 915 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AP005639.1-201ENST00000526939 192 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 GLYATL1P4-201ENST00000529326 906 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 MIR4786-201ENST00000583954 80 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AL352984.2-202ENST00000613699 155 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC012653.2-201ENST00000621880 420 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AL356361.1-201ENST00000400943 1459 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 AC020658.2-201ENST00000559030 4020 ntBASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CCNB1IP1Q9NPC3 IMMTP1-201ENST00000435590 2219 ntBASIC6.19□□□□□ -1.42
CCNB1IP1Q9NPC3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms