Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 DPY19L1P1-201ENST00000417811 2594 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 LCN1P2-201ENST00000372030 223 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 RNA5SP177-201ENST00000410122 107 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 SNRPEP5-201ENST00000425442 278 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC134879.1-201ENST00000426062 394 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 CCNJP2-201ENST00000457810 1163 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 RPL5P12-201ENST00000477071 851 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 RN7SKP11-201ENST00000517018 287 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC084337.1-201ENST00000524809 686 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 DCN-209ENST00000546745 1026 ntTSL 3 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 BMS1P8-201ENST00000565049 1178 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AL356986.1-201ENST00000604085 341 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AL157899.1-201ENST00000604110 936 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 AC017037.4-201ENST00000624526 826 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC8.07□□□□□ -1.12
UPF2Q9HAU5 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
UPF2Q9HAU5 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 HSPD1P8-201ENST00000400121 1658 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 RNA5SP115-201ENST00000411160 107 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 AC023141.1-201ENST00000419418 379 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 ANXA2P2-201ENST00000435128 1020 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 SERPINA7P1-201ENST00000443077 631 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 VN1R38P-201ENST00000450265 887 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 AC004692.1-201ENST00000455430 424 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 RN7SL165P-201ENST00000477476 291 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 BUB1P1-201ENST00000603541 607 ntBASIC8.06□□□□□ -1.12
UPF2Q9HAU5 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
UPF2Q9HAU5 AC011369.2-201ENST00000624423 1567 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 GOT2P1-201ENST00000440922 1309 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 LINC01808-203ENST00000641932 1643 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 U3.14-201ENST00000365363 227 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 RNA5SP280-201ENST00000411230 115 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 RPL29P7-201ENST00000440227 457 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 MARK2P8-201ENST00000476069 952 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 NDUFA3P2-201ENST00000531434 232 ntBASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 AC009063.2-201ENST00000563981 906 ntTSL 3 BASIC8.05□□□□□ -1.12
UPF2Q9HAU5 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms