Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 RNA5SP251-201ENST00000410614 137 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AL354893.1-201ENST00000433735 348 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC105052.2-201ENST00000434317 794 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC004692.1-201ENST00000455430 424 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 SEPT14P1-201ENST00000458703 648 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 RN7SL392P-201ENST00000473024 299 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 RN7SL314P-201ENST00000490735 292 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 RN7SL775P-201ENST00000498361 336 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 MTCO3P42-201ENST00000509488 518 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 MTCO3P39-201ENST00000514812 518 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AP001804.1-201ENST00000526868 919 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 OR4A6P-201ENST00000534364 970 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 ACTG1P15-201ENST00000570019 1063 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 MIR3187-201ENST00000583431 70 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC006116.6-201ENST00000593258 1103 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 PRR13P5-201ENST00000596581 442 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC125494.2-201ENST00000602431 657 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 PART1_3.1-201ENST00000619680 131 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
RFT1Q96AA3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 IMMTP1-201ENST00000435590 2219 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 AC005225.5-201ENST00000623547 2225 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.98□□□□□ -1.45
RFT1Q96AA3 KYNUP2-201ENST00000582280 1329 ntBASIC5.98□□□□□ -1.45
RFT1Q96AA3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 RPL24P4-201ENST00000326586 421 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 CLEC1B-202ENST00000348658 869 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ARL4A-201ENST00000356797 1147 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 RNA5SP65-201ENST00000363166 119 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 NPM1P38-201ENST00000403835 865 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 LINC01704-201ENST00000414848 834 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 RANP7-201ENST00000418085 644 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL596451.1-201ENST00000419824 572 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AF274573.1-201ENST00000430535 494 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 NFYAP1-201ENST00000431953 972 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 LSM3P3-201ENST00000436601 306 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL136115.1-201ENST00000447478 517 ntTSL 2 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 RPL34P34-201ENST00000465389 354 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 RN7SL561P-201ENST00000488553 281 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 GAPDHP38-201ENST00000503632 1002 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
RFT1Q96AA3 Z99943.2-201ENST00000507585 266 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 AC087752.2-201ENST00000521219 281 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AP006437.1-202ENST00000530327 933 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 REG4-204ENST00000530654 612 ntTSL 5 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 BMS1P8-201ENST00000565049 1178 ntBASIC5.97□□□□□ -1.45
RFT1Q96AA3 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC5.97□□□□□ -1.45
RFT1Q96AA3 OOSP1P2-201ENST00000579644 351 ntBASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms