Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 NIPA2P2-201ENST00000496376 1083 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.71□□□□□ -1.02
HLA-CQ95604 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC8.71□□□□□ -1.02
HLA-CQ95604 AC015818.5-201ENST00000578659 356 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 RN7SL14P-201ENST00000579715 298 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 MIR1273F-201ENST00000580581 99 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC8.71□□□□□ -1.02
HLA-CQ95604 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.71□□□□□ -1.02
HLA-CQ95604 AC005261.5-201ENST00000596280 355 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 AL162730.1-201ENST00000605734 292 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-CQ95604 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-CQ95604 FAM157B-203ENST00000639350 358 ntBASIC8.71□□□□□ -1.02
HLA-CQ95604 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
HLA-CQ95604 TUBA1A-202ENST00000301071 1915 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 BTN2A2-201ENST00000352867 3241 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 ABLIM1-203ENST00000369253 2255 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-CQ95604 NUDT13-207ENST00000544879 2258 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC8.71□□□□□ -1.02
HLA-CQ95604 TMEM231-201ENST00000258173 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 MEP1B-201ENST00000269202 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 TNFAIP8-206ENST00000504771 8681 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 IKZF3-207ENST00000377944 1669 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 IKZF3-208ENST00000377945 1696 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 MAP3K13-209ENST00000443863 3025 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 CDC42SE2-208ENST00000505065 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 CCR3-201ENST00000357422 2000 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 ZNF750-201ENST00000269394 3713 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 LIPC-201ENST00000299022 2751 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HLA-CQ95604 C11orf44-201ENST00000317019 3547 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 CDH26-203ENST00000350849 2494 ntTSL 2 BASIC8.71□□□□□ -1.02
HLA-CQ95604 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
HLA-CQ95604 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 TRAF1-203ENST00000546084 3715 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AC011365.1-201ENST00000522615 3478 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 PPM1L-202ENST00000464260 2735 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 TTLL6-202ENST00000393382 3551 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 LILRB4-204ENST00000391736 4002 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 CD200-201ENST00000315711 2129 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 RNU6-707P-201ENST00000364647 95 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 RNU6-621P-201ENST00000364752 109 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 ANK3-205ENST00000373827 7202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 MIR595-201ENST00000384905 96 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AL161787.1-201ENST00000401543 174 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AL121977.1-201ENST00000401636 979 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AL139135.1-201ENST00000412675 209 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AL161742.1-201ENST00000418154 584 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 NENFP1-201ENST00000419476 466 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-CQ95604 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 RPSAP62-201ENST00000432596 833 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 ARPC3P1-201ENST00000437218 533 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AC073476.1-201ENST00000452854 407 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AL035407.2-201ENST00000454090 378 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 RN7SL416P-201ENST00000494042 298 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC025459.1-201ENST00000504072 156 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC8.7□□□□□ -1.02
HLA-CQ95604 MRPL49P1-201ENST00000505951 535 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 ARL2BPP6-201ENST00000512757 439 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-CQ95604 IGKV1D-32-201ENST00000517449 318 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC008676.1-202ENST00000520658 545 ntTSL 4 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AC008619.1-201ENST00000524312 567 ntTSL 4 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC8.7□□□□□ -1.02
HLA-CQ95604 OR4C9P-201ENST00000532368 925 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC005832.3-201ENST00000537929 631 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 AC073913.2-201ENST00000541512 145 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 LINC02385-201ENST00000547554 428 ntTSL 5 BASIC8.7□□□□□ -1.02
HLA-CQ95604 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-CQ95604 CD300LF-208ENST00000581500 720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
HLA-CQ95604 VN1R79P-201ENST00000593540 513 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 EXOSC3P2-201ENST00000594464 497 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 STX8P1-201ENST00000603161 355 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC8.7□□□□□ -1.02
HLA-CQ95604 AC023158.2-201ENST00000614876 543 ntBASIC8.7□□□□□ -1.02
HLA-CQ95604 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms