Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC117392.1-201ENST00000487061 596 ntBASIC4.6□□□□□ -1.67
RPL39P62891 AC021146.11-201ENST00000503319 491 ntBASIC4.6□□□□□ -1.67
RPL39P62891 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC4.6□□□□□ -1.67
RPL39P62891 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.6□□□□□ -1.67
RPL39P62891 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC4.6□□□□□ -1.67
RPL39P62891 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 HIGD1AP9-201ENST00000550710 279 ntBASIC4.6□□□□□ -1.67
RPL39P62891 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 RN7SL25P-201ENST00000583862 260 ntBASIC4.6□□□□□ -1.67
RPL39P62891 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC4.6□□□□□ -1.67
RPL39P62891 PART1_3.1-201ENST00000619680 131 ntBASIC4.6□□□□□ -1.67
RPL39P62891 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.6□□□□□ -1.67
RPL39P62891 AC012100.3-201ENST00000624738 575 ntBASIC4.6□□□□□ -1.67
RPL39P62891 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
RPL39P62891 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC4.6□□□□□ -1.67
RPL39P62891 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.6□□□□□ -1.67
RPL39P62891 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.6□□□□□ -1.67
RPL39P62891 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.6□□□□□ -1.67
RPL39P62891 AC105235.1-201ENST00000623208 1816 ntBASIC4.6□□□□□ -1.67
RPL39P62891 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
RPL39P62891 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC4.6□□□□□ -1.67
RPL39P62891 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
RPL39P62891 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.6□□□□□ -1.67
RPL39P62891 AL359263.1-201ENST00000441188 2796 ntBASIC4.59□□□□□ -1.67
RPL39P62891 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC4.59□□□□□ -1.67
RPL39P62891 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RPL39P62891 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 RNA5SP350-201ENST00000363298 111 ntBASIC4.59□□□□□ -1.67
RPL39P62891 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 ZNF402P-201ENST00000404435 3100 ntBASIC4.59□□□□□ -1.67
RPL39P62891 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.59□□□□□ -1.67
RPL39P62891 LSM5-202ENST00000409292 538 ntTSL 2 BASIC4.59□□□□□ -1.67
RPL39P62891 RNA5SP177-201ENST00000410122 107 ntBASIC4.59□□□□□ -1.67
RPL39P62891 RN7SKP161-201ENST00000411110 305 ntBASIC4.59□□□□□ -1.67
RPL39P62891 CYP4F34P-201ENST00000425951 481 ntBASIC4.59□□□□□ -1.67
RPL39P62891 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 RPL34P27-201ENST00000428810 349 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 VN1R38P-201ENST00000450265 887 ntBASIC4.59□□□□□ -1.67
RPL39P62891 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC4.59□□□□□ -1.67
RPL39P62891 AC133965.1-201ENST00000452984 354 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC019080.2-201ENST00000453859 394 ntBASIC4.59□□□□□ -1.67
RPL39P62891 SLC25A51P1-201ENST00000468432 871 ntBASIC4.59□□□□□ -1.67
RPL39P62891 RN7SL849P-201ENST00000485236 295 ntBASIC4.59□□□□□ -1.67
RPL39P62891 RN7SL182P-201ENST00000496499 300 ntBASIC4.59□□□□□ -1.67
RPL39P62891 RASGRF2-AS1-201ENST00000505107 665 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 MTCYBP44-201ENST00000514835 823 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 SFTA3-210ENST00000521945 1116 ntTSL 2 BASIC4.59□□□□□ -1.67
RPL39P62891 TBCA-209ENST00000522370 435 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC4.59□□□□□ -1.67
RPL39P62891 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC4.59□□□□□ -1.67
RPL39P62891 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.59□□□□□ -1.67
RPL39P62891 AC023245.2-201ENST00000530760 2978 ntBASIC4.59□□□□□ -1.67
RPL39P62891 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC4.59□□□□□ -1.67
RPL39P62891 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 AC091304.4-201ENST00000565703 620 ntBASIC4.59□□□□□ -1.67
RPL39P62891 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 AC233702.7-202ENST00000582941 211 ntBASIC4.59□□□□□ -1.67
RPL39P62891 MIR4786-201ENST00000583954 80 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 AL049840.5-201ENST00000602827 552 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC092032.1-201ENST00000603090 165 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC4.59□□□□□ -1.67
RPL39P62891 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC024255.1-201ENST00000614376 102 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC005277.2-201ENST00000617898 390 ntBASIC4.59□□□□□ -1.67
RPL39P62891 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 AC021422.1-201ENST00000621212 473 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC093909.6-201ENST00000624757 775 ntBASIC4.59□□□□□ -1.67
RPL39P62891 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
RPL39P62891 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 AL132640.3-201ENST00000630473 177 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC026108.1-201ENST00000635444 547 ntBASIC4.59□□□□□ -1.67
RPL39P62891 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC4.59□□□□□ -1.67
RPL39P62891 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
RPL39P62891 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
RPL39P62891 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms