Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
PMS1P54277 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
PMS1P54277 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
PMS1P54277 HNRNPH1P2-201ENST00000396845 1210 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC7.81□□□□□ -1.16
PMS1P54277 RN7SKP254-201ENST00000410685 310 ntBASIC7.81□□□□□ -1.16
PMS1P54277 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 AC092865.3-201ENST00000425390 1026 ntBASIC7.81□□□□□ -1.16
PMS1P54277 MTND1P10-201ENST00000426108 832 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AL357632.1-201ENST00000426688 643 ntBASIC7.81□□□□□ -1.16
PMS1P54277 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 AL604028.1-201ENST00000430643 598 ntTSL 2 BASIC7.81□□□□□ -1.16
PMS1P54277 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.81□□□□□ -1.16
PMS1P54277 AC135721.2-201ENST00000464237 300 ntBASIC7.81□□□□□ -1.16
PMS1P54277 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 RPS14P8-201ENST00000478778 369 ntBASIC7.81□□□□□ -1.16
PMS1P54277 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC7.81□□□□□ -1.16
PMS1P54277 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.81□□□□□ -1.16
PMS1P54277 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.81□□□□□ -1.16
PMS1P54277 OR4V1P-201ENST00000525394 1140 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 OR4A21P-201ENST00000532759 944 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 AC135279.1-201ENST00000543493 504 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 FXNP1-201ENST00000555153 337 ntBASIC7.81□□□□□ -1.16
PMS1P54277 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC7.81□□□□□ -1.16
PMS1P54277 AP001160.4-201ENST00000596971 382 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AC008751.2-201ENST00000597885 980 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AC106052.1-201ENST00000608029 497 ntBASIC7.81□□□□□ -1.16
PMS1P54277 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC7.81□□□□□ -1.16
PMS1P54277 MIR8084-201ENST00000614105 89 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AL035425.4-201ENST00000624509 1063 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 AC073488.7-201ENST00000633785 778 ntBASIC7.81□□□□□ -1.16
PMS1P54277 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.81□□□□□ -1.16
PMS1P54277 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC7.81□□□□□ -1.16
PMS1P54277 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.81□□□□□ -1.16
PMS1P54277 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 KIF20A-201ENST00000394894 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 THAP12P3-201ENST00000456373 2266 ntBASIC7.81□□□□□ -1.16
PMS1P54277 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 LINC01616-201ENST00000561816 2280 ntBASIC7.81□□□□□ -1.16
PMS1P54277 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
PMS1P54277 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.81□□□□□ -1.16
PMS1P54277 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC7.81□□□□□ -1.16
PMS1P54277 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC7.81□□□□□ -1.16
PMS1P54277 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 SORBS1-209ENST00000371245 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
PMS1P54277 AL356361.1-201ENST00000400943 1459 ntBASIC7.81□□□□□ -1.16
PMS1P54277 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.81□□□□□ -1.16
PMS1P54277 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
PMS1P54277 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
PMS1P54277 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.8□□□□□ -1.16
PMS1P54277 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.8□□□□□ -1.16
PMS1P54277 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 PCF11-AS1-201ENST00000602322 1516 ntBASIC7.8□□□□□ -1.16
PMS1P54277 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
PMS1P54277 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
PMS1P54277 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PMS1P54277 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PMS1P54277 OR10A3-201ENST00000360759 1061 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PMS1P54277 RNA5SP427-201ENST00000365323 119 ntBASIC7.8□□□□□ -1.16
PMS1P54277 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.8□□□□□ -1.16
PMS1P54277 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 SNX18P13-201ENST00000412442 529 ntBASIC7.8□□□□□ -1.16
PMS1P54277 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 AL157698.1-201ENST00000415190 1011 ntBASIC7.8□□□□□ -1.16
PMS1P54277 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 LIX1L-AS1-203ENST00000421764 287 ntTSL 2 BASIC7.8□□□□□ -1.16
PMS1P54277 GYG1P2-201ENST00000426437 1006 ntBASIC7.8□□□□□ -1.16
PMS1P54277 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
PMS1P54277 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.8□□□□□ -1.16
PMS1P54277 AL591719.1-201ENST00000444669 744 ntBASIC7.8□□□□□ -1.16
PMS1P54277 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 AC073072.2-201ENST00000447425 348 ntBASIC7.8□□□□□ -1.16
PMS1P54277 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.8□□□□□ -1.16
PMS1P54277 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 PABPC1P10-201ENST00000464731 381 ntBASIC7.8□□□□□ -1.16
PMS1P54277 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 OR9N1P-202ENST00000494289 481 ntBASIC7.8□□□□□ -1.16
PMS1P54277 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.8□□□□□ -1.16
PMS1P54277 HMGB1P47-201ENST00000511281 589 ntBASIC7.8□□□□□ -1.16
PMS1P54277 AC016559.1-201ENST00000511420 199 ntBASIC7.8□□□□□ -1.16
PMS1P54277 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms