Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 RPS27AP2-201ENST00000457576 465 ntBASIC9.28□□□□□ -0.92
CPS1P31327 TMEM97P2-201ENST00000517841 403 ntBASIC9.28□□□□□ -0.92
CPS1P31327 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC9.28□□□□□ -0.92
CPS1P31327 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC9.28□□□□□ -0.92
CPS1P31327 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC9.28□□□□□ -0.92
CPS1P31327 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC9.28□□□□□ -0.92
CPS1P31327 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC9.28□□□□□ -0.92
CPS1P31327 AP000577.1-201ENST00000624366 878 ntBASIC9.28□□□□□ -0.92
CPS1P31327 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC9.28□□□□□ -0.92
CPS1P31327 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CPS1P31327 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC9.28□□□□□ -0.92
CPS1P31327 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CPS1P31327 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CPS1P31327 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CPS1P31327 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CPS1P31327 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CPS1P31327 TMBIM6-209ENST00000547798 2494 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
CPS1P31327 AL023495.1-201ENST00000413005 1923 ntTSL 2 BASIC9.28□□□□□ -0.92
CPS1P31327 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC9.28□□□□□ -0.92
CPS1P31327 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
CPS1P31327 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
CPS1P31327 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
CPS1P31327 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC9.27□□□□□ -0.92
CPS1P31327 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC9.27□□□□□ -0.92
CPS1P31327 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 RPL31-202ENST00000409000 641 ntTSL 2 BASIC9.27□□□□□ -0.93
CPS1P31327 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC9.27□□□□□ -0.93
CPS1P31327 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC9.27□□□□□ -0.93
CPS1P31327 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC9.27□□□□□ -0.93
CPS1P31327 DEFA9P-201ENST00000433042 285 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AC016908.1-201ENST00000442571 1219 ntBASIC9.27□□□□□ -0.93
CPS1P31327 CST12P-201ENST00000457644 362 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AC098847.1-201ENST00000473094 348 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AL158068.1-201ENST00000506116 616 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC9.27□□□□□ -0.93
CPS1P31327 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC9.27□□□□□ -0.93
CPS1P31327 AL591767.3-201ENST00000554632 525 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AC087575.1-201ENST00000585087 229 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AC020916.2-201ENST00000591242 360 ntBASIC9.27□□□□□ -0.93
CPS1P31327 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 TET3-202ENST00000409262 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC9.27□□□□□ -0.93
CPS1P31327 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC9.27□□□□□ -0.93
CPS1P31327 USP46-202ENST00000451218 4622 ntTSL 5 BASIC9.27□□□□□ -0.93
CPS1P31327 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC9.27□□□□□ -0.93
CPS1P31327 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC9.27□□□□□ -0.93
CPS1P31327 UHRF1BP1-201ENST00000192788 9570 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC9.27□□□□□ -0.93
CPS1P31327 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CPS1P31327 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC9.27□□□□□ -0.93
CPS1P31327 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CPS1P31327 CYP2G2P-201ENST00000594920 1485 ntBASIC9.27□□□□□ -0.93
CPS1P31327 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 AC034111.1-201ENST00000562143 3770 ntBASIC9.26□□□□□ -0.93
CPS1P31327 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC9.26□□□□□ -0.93
CPS1P31327 AL590065.1-201ENST00000603371 4774 ntBASIC9.26□□□□□ -0.93
CPS1P31327 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 AL355916.1-202ENST00000508827 5103 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 EEF1B2P8-201ENST00000414101 671 ntBASIC9.26□□□□□ -0.93
CPS1P31327 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
CPS1P31327 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
CPS1P31327 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC9.26□□□□□ -0.93
CPS1P31327 AC118658.2-201ENST00000618697 459 ntBASIC9.26□□□□□ -0.93
CPS1P31327 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC9.26□□□□□ -0.93
CPS1P31327 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC9.26□□□□□ -0.93
CPS1P31327 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC9.26□□□□□ -0.93
CPS1P31327 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
CPS1P31327 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 AC009108.3-201ENST00000602739 3515 ntBASIC9.26□□□□□ -0.93
CPS1P31327 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 SPATA31C2-201ENST00000324915 3777 ntBASIC9.26□□□□□ -0.93
CPS1P31327 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 LINC02334-201ENST00000617568 4959 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC9.26□□□□□ -0.93
CPS1P31327 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
CPS1P31327 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC9.26□□□□□ -0.93
CPS1P31327 H2AFZP6-201ENST00000444403 394 ntBASIC9.26□□□□□ -0.93
CPS1P31327 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC9.26□□□□□ -0.93
CPS1P31327 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms