Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AP002800.1-201ENST00000624982 2225 ntBASIC6.71□□□□□ -1.34
CDH3P22223 OFD1P17-201ENST00000437639 3018 ntBASIC6.71□□□□□ -1.34
CDH3P22223 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CDH3P22223 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 AL451142.1-201ENST00000375867 775 ntBASIC6.71□□□□□ -1.34
CDH3P22223 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.71□□□□□ -1.34
CDH3P22223 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH3P22223 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH3P22223 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH3P22223 LSM3P3-201ENST00000436601 306 ntBASIC6.71□□□□□ -1.34
CDH3P22223 LINC01638-202ENST00000444114 637 ntTSL 2 BASIC6.71□□□□□ -1.34
CDH3P22223 AL845321.1-201ENST00000444603 348 ntBASIC6.71□□□□□ -1.34
CDH3P22223 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH3P22223 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.71□□□□□ -1.34
CDH3P22223 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 FOXP1-AS1-201ENST00000465742 700 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.71□□□□□ -1.34
CDH3P22223 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CDH3P22223 AC007537.1-201ENST00000539347 327 ntBASIC6.71□□□□□ -1.34
CDH3P22223 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 ACTG1P15-201ENST00000570019 1063 ntBASIC6.71□□□□□ -1.34
CDH3P22223 MIR4301-201ENST00000577203 66 ntBASIC6.71□□□□□ -1.34
CDH3P22223 MIR378C-201ENST00000578683 81 ntBASIC6.71□□□□□ -1.34
CDH3P22223 RN7SL32P-201ENST00000580514 281 ntBASIC6.71□□□□□ -1.34
CDH3P22223 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 MRPL57P3-201ENST00000619218 176 ntBASIC6.71□□□□□ -1.34
CDH3P22223 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 AC099654.15-201ENST00000639802 509 ntBASIC6.71□□□□□ -1.34
CDH3P22223 CASC19-232ENST00000641480 1244 ntBASIC6.71□□□□□ -1.34
CDH3P22223 LCOR-201ENST00000286067 4542 ntBASIC6.71□□□□□ -1.34
CDH3P22223 MAPK10-261ENST00000641050 3109 ntBASIC6.71□□□□□ -1.34
CDH3P22223 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.71□□□□□ -1.34
CDH3P22223 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
CDH3P22223 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CDH3P22223 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.71□□□□□ -1.34
CDH3P22223 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 AC102941.1-201ENST00000567616 1537 ntBASIC6.71□□□□□ -1.34
CDH3P22223 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDH3P22223 FBLN5-205ENST00000556154 1875 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CDH3P22223 TRIM53CP-201ENST00000531490 1354 ntBASIC6.7□□□□□ -1.34
CDH3P22223 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH3P22223 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH3P22223 BTG3P1-201ENST00000435859 716 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH3P22223 CT45A11P-201ENST00000448043 1134 ntBASIC6.7□□□□□ -1.34
CDH3P22223 PPIAP32-201ENST00000449940 472 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AL354714.5-201ENST00000450131 590 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH3P22223 PABPC1P1-201ENST00000506347 591 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AC112225.1-201ENST00000508230 297 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
CDH3P22223 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH3P22223 AC113191.1-201ENST00000517759 403 ntBASIC6.7□□□□□ -1.34
CDH3P22223 IGKV2D-38-201ENST00000518423 240 ntBASIC6.7□□□□□ -1.34
CDH3P22223 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH3P22223 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC6.7□□□□□ -1.34
CDH3P22223 AC131935.1-201ENST00000524621 333 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.7□□□□□ -1.34
CDH3P22223 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH3P22223 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH3P22223 AL157762.1-201ENST00000619612 415 ntBASIC6.7□□□□□ -1.34
CDH3P22223 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.7□□□□□ -1.34
CDH3P22223 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 AC010168.2-201ENST00000562691 5428 ntBASIC6.7□□□□□ -1.34
CDH3P22223 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 API5P1-201ENST00000424316 1510 ntBASIC6.7□□□□□ -1.34
CDH3P22223 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDH3P22223 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC6.7□□□□□ -1.34
CDH3P22223 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 ATP5BP1-201ENST00000411980 1574 ntBASIC6.69□□□□□ -1.34
CDH3P22223 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDH3P22223 UGT2B27P-201ENST00000505092 1620 ntBASIC6.69□□□□□ -1.34
CDH3P22223 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.69□□□□□ -1.34
CDH3P22223 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms