Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 RPL7P61-201ENST00000451721 751 ntBASIC8.36□□□□□ -1.07
LIG1P18858 PCMTD1P3-201ENST00000451824 472 ntBASIC8.36□□□□□ -1.07
LIG1P18858 IGKV1OR22-5-201ENST00000458718 354 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC087672.1-201ENST00000479876 766 ntBASIC8.36□□□□□ -1.07
LIG1P18858 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC8.36□□□□□ -1.07
LIG1P18858 AC006070.1-201ENST00000508151 193 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 Y_RNA.688-201ENST00000516565 95 ntBASIC8.36□□□□□ -1.07
LIG1P18858 RNU6-334P-201ENST00000517072 102 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AP003355.1-201ENST00000518956 587 ntBASIC8.36□□□□□ -1.07
LIG1P18858 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 OR4A13P-201ENST00000529316 942 ntBASIC8.36□□□□□ -1.07
LIG1P18858 REG4-204ENST00000530654 612 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.36□□□□□ -1.07
LIG1P18858 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC8.36□□□□□ -1.07
LIG1P18858 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC8.36□□□□□ -1.07
LIG1P18858 AL442163.2-201ENST00000553912 710 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC8.36□□□□□ -1.07
LIG1P18858 AL118558.1-201ENST00000557551 566 ntTSL 3 BASIC8.36□□□□□ -1.07
LIG1P18858 AC012291.1-201ENST00000559666 429 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC8.36□□□□□ -1.07
LIG1P18858 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 NPM1P45-201ENST00000583151 559 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC005252.1-201ENST00000604518 1063 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC143336.1-201ENST00000614164 836 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 CYCSP41-201ENST00000616920 296 ntBASIC8.36□□□□□ -1.07
LIG1P18858 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 AC063952.1-203ENST00000634410 658 ntBASIC8.36□□□□□ -1.07
LIG1P18858 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.36□□□□□ -1.07
LIG1P18858 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 AL451064.2-201ENST00000623514 1654 ntBASIC8.36□□□□□ -1.07
LIG1P18858 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 AC005839.1-201ENST00000624148 3213 ntBASIC8.36□□□□□ -1.07
LIG1P18858 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
LIG1P18858 AC110792.3-201ENST00000595906 1614 ntBASIC8.36□□□□□ -1.07
LIG1P18858 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
LIG1P18858 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.36□□□□□ -1.07
LIG1P18858 MTND4P5-201ENST00000435821 1374 ntBASIC8.35□□□□□ -1.07
LIG1P18858 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.35□□□□□ -1.07
LIG1P18858 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 NF1-214ENST00000490416 1329 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
LIG1P18858 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 RNA5SP79-201ENST00000365193 109 ntBASIC8.35□□□□□ -1.07
LIG1P18858 SNORA30B-201ENST00000365319 129 ntBASIC8.35□□□□□ -1.07
LIG1P18858 RNU6-316P-201ENST00000391027 107 ntBASIC8.35□□□□□ -1.07
LIG1P18858 GRXCR1-201ENST00000399770 991 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
LIG1P18858 AP002530.1-201ENST00000405705 684 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AL773545.3-201ENST00000414297 706 ntBASIC8.35□□□□□ -1.07
LIG1P18858 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 MARK2P12-201ENST00000420129 585 ntBASIC8.35□□□□□ -1.07
LIG1P18858 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.35□□□□□ -1.07
LIG1P18858 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 ELOCP3-201ENST00000439303 348 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 CDC42P2-201ENST00000448566 569 ntBASIC8.35□□□□□ -1.07
LIG1P18858 MRPS21P1-201ENST00000453850 223 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AGKP1-201ENST00000455254 1263 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AC004692.1-201ENST00000455430 424 ntBASIC8.35□□□□□ -1.07
LIG1P18858 RPL34P22-201ENST00000468193 318 ntBASIC8.35□□□□□ -1.07
LIG1P18858 RPL23AP73-201ENST00000492507 471 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 AC012613.1-202ENST00000512647 424 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 AL117351.2-201ENST00000513571 157 ntBASIC8.35□□□□□ -1.07
LIG1P18858 OR7E87P-201ENST00000532397 929 ntBASIC8.35□□□□□ -1.07
LIG1P18858 REXO2-218ENST00000544827 880 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 DCN-215ENST00000550099 719 ntTSL 2 BASIC8.35□□□□□ -1.07
LIG1P18858 OR4U1P-201ENST00000554958 912 ntBASIC8.35□□□□□ -1.07
LIG1P18858 CKS1BP1-201ENST00000555221 240 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 AC243312.1-201ENST00000570582 275 ntBASIC8.35□□□□□ -1.07
LIG1P18858 MTCYBP33-201ENST00000575007 1130 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC8.35□□□□□ -1.07
LIG1P18858 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 OR7E94P-202ENST00000601375 790 ntBASIC8.35□□□□□ -1.07
LIG1P18858 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
LIG1P18858 AP005329.3-201ENST00000609924 686 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AC068234.2-201ENST00000619646 522 ntBASIC8.35□□□□□ -1.07
LIG1P18858 AC095038.2-201ENST00000621464 1070 ntBASIC8.35□□□□□ -1.07
LIG1P18858 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC8.35□□□□□ -1.07
LIG1P18858 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
LIG1P18858 AC008691.1-209ENST00000642094 814 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms