Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 U3.48-201ENST00000363172 216 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 HNRNPH1P2-201ENST00000396845 1210 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC8.36□□□□□ -1.07
HMGB1P09429 AL157698.1-201ENST00000415190 1011 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.36□□□□□ -1.07
HMGB1P09429 SMARCA2-211ENST00000417599 980 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 DUTP4-201ENST00000424782 475 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AL604028.2-201ENST00000437848 788 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 CR391992.1-201ENST00000438601 394 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AC069277.2-201ENST00000454211 432 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 SNORA35.1-201ENST00000458908 128 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AC091982.1-202ENST00000473923 343 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC8.36□□□□□ -1.07
HMGB1P09429 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.36□□□□□ -1.07
HMGB1P09429 RNA5SP518-201ENST00000515957 119 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 SCARNA6-201ENST00000515982 265 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 GLYATL1P4-201ENST00000529326 906 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 EIF4A2P5-201ENST00000529914 499 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 OR7E161P-201ENST00000533722 967 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 PSMC1P8-201ENST00000536820 1296 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 MIR4786-201ENST00000583954 80 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 SNX6P1-201ENST00000601728 1224 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 BMS1P7-201ENST00000602440 1052 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 BX322635.1-201ENST00000605804 496 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 AC068870.3-201ENST00000625077 2536 ntBASIC8.36□□□□□ -1.07
HMGB1P09429 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
HMGB1P09429 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
HMGB1P09429 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
HMGB1P09429 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 RLIMP2-201ENST00000427891 1563 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 RPL12P13-201ENST00000310055 497 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC8.35□□□□□ -1.07
HMGB1P09429 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 AL358178.1-201ENST00000407698 397 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 RN7SKP39-201ENST00000410773 322 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 VDAC1P10-201ENST00000416715 891 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 CLIC4P3-201ENST00000422221 752 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 AL356806.1-201ENST00000422524 916 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 KIF4CP-201ENST00000422742 1279 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 ANXA2P2-201ENST00000435128 1020 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 DBIL5P2-201ENST00000443827 253 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC8.35□□□□□ -1.07
HMGB1P09429 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 MRPL49P1-201ENST00000505951 535 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 AC095057.1-201ENST00000507583 168 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC8.35□□□□□ -1.07
HMGB1P09429 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
HMGB1P09429 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC8.35□□□□□ -1.07
HMGB1P09429 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 AC013356.3-201ENST00000558601 584 ntTSL 3 BASIC8.35□□□□□ -1.07
HMGB1P09429 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC8.35□□□□□ -1.07
HMGB1P09429 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.35□□□□□ -1.07
HMGB1P09429 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 AC122710.3-201ENST00000606566 541 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC8.35□□□□□ -1.07
HMGB1P09429 JAML-213ENST00000640745 951 ntTSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC8.35□□□□□ -1.07
HMGB1P09429 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 AC125232.1-201ENST00000452554 1408 ntBASIC8.35□□□□□ -1.07
HMGB1P09429 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC8.35□□□□□ -1.07
HMGB1P09429 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
HMGB1P09429 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms