Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 OR6N2-201ENST00000339258 954 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SPTA1P02549 RNA5SP242-201ENST00000364171 118 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 GAPDHP57-201ENST00000424400 585 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 AL121776.1-201ENST00000429337 372 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 FMO7P-201ENST00000436045 768 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 RPL5P7-201ENST00000444235 813 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AC234771.3-201ENST00000454984 622 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC066616.1-201ENST00000486795 413 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 COX6B1P4-201ENST00000519826 484 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.16□□□□□ -1.42
SPTA1P02549 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.16□□□□□ -1.42
SPTA1P02549 AC018692.2-201ENST00000624130 348 ntBASIC6.16□□□□□ -1.42
SPTA1P02549 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SPTA1P02549 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.16□□□□□ -1.42
SPTA1P02549 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SPTA1P02549 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC6.15□□□□□ -1.42
SPTA1P02549 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.15□□□□□ -1.42
SPTA1P02549 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SPTA1P02549 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.15□□□□□ -1.42
SPTA1P02549 RN7SKP174-201ENST00000363803 330 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 LARP1P1-201ENST00000407692 292 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.15□□□□□ -1.42
SPTA1P02549 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.15□□□□□ -1.42
SPTA1P02549 NPM1P22-201ENST00000427761 952 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 PPIAP27-201ENST00000453800 265 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 SNORD46.2-201ENST00000516021 102 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.15□□□□□ -1.42
SPTA1P02549 SYPL1P2-201ENST00000582878 727 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SPTA1P02549 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.15□□□□□ -1.42
SPTA1P02549 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.15□□□□□ -1.42
SPTA1P02549 AL445649.1-201ENST00000615941 691 ntBASIC6.15□□□□□ -1.42
SPTA1P02549 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SPTA1P02549 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.15□□□□□ -1.42
SPTA1P02549 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.15□□□□□ -1.42
SPTA1P02549 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SPTA1P02549 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 PSMC1P6-201ENST00000477233 1319 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 PSMC1P4-201ENST00000515236 1327 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 MIR585-201ENST00000384887 94 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.15□□□□□ -1.43
SPTA1P02549 GEMIN2P2-201ENST00000418195 715 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.15□□□□□ -1.43
SPTA1P02549 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.15□□□□□ -1.43
SPTA1P02549 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.43
SPTA1P02549 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC6.15□□□□□ -1.43
SPTA1P02549 H3F3AP3-201ENST00000497682 407 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SPTA1P02549 IGHVIII-67-3-201ENST00000517650 232 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.15□□□□□ -1.43
SPTA1P02549 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.15□□□□□ -1.43
SPTA1P02549 AC026956.1-201ENST00000558741 396 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 MIR1273E-201ENST00000581165 102 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.15□□□□□ -1.43
SPTA1P02549 AL513218.1-201ENST00000606527 391 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC6.15□□□□□ -1.43
SPTA1P02549 MIR663AHG-237ENST00000615682 1030 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 CASC19-208ENST00000641056 1292 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 CASC19-227ENST00000641411 1285 ntBASIC6.15□□□□□ -1.43
SPTA1P02549 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC6.15□□□□□ -1.43
SPTA1P02549 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SPTA1P02549 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.14□□□□□ -1.43
SPTA1P02549 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 ESRRG-221ENST00000493603 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.14□□□□□ -1.43
SPTA1P02549 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SPTA1P02549 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.14□□□□□ -1.43
SPTA1P02549 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 AC002127.1-201ENST00000421305 225 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC6.14□□□□□ -1.43
SPTA1P02549 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SPTA1P02549 PMS2P9-201ENST00000441237 515 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.14□□□□□ -1.43
SPTA1P02549 PRDX1P1-201ENST00000449329 596 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 SNX18P26-201ENST00000458433 740 ntBASIC6.14□□□□□ -1.43
SPTA1P02549 AC068305.2-201ENST00000550567 1205 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms