Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC243960.7-201ENST00000623532 707 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AC104820.1-201ENST00000624183 307 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AL355480.1-201ENST00000629041 99 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 AL078595.2-201ENST00000605309 1780 ntBASIC7.07□□□□□ -1.28
DKK3Q9UBP4 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.07□□□□□ -1.28
DKK3Q9UBP4 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CLCC1-203ENST00000356970 4803 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC005261.2-201ENST00000593427 4258 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AL034417.1-201ENST00000399343 800 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC244452.1-201ENST00000413798 141 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 E2F6P1-201ENST00000428850 745 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 MYL6P3-201ENST00000436904 432 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 RPS10P14-201ENST00000440748 502 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CEACAMP11-201ENST00000455211 583 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC005165.2-201ENST00000466070 380 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC092905.1-201ENST00000467527 949 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC096661.1-201ENST00000515870 822 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 IGLC4-201ENST00000517690 248 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 MTND1P36-201ENST00000522384 936 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 IGLVV-66-201ENST00000523818 341 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC021820.1-201ENST00000525564 808 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC027667.1-201ENST00000545814 304 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC080011.1-201ENST00000552378 989 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AL132640.1-201ENST00000559594 619 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 ACTG1P15-201ENST00000570019 1063 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 OOSP1P2-201ENST00000579644 351 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC011498.1-203ENST00000589066 359 ntTSL 3 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 BNIP3P7-201ENST00000605641 516 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC005899.6-201ENST00000620729 297 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 RBPJP6-201ENST00000411556 1431 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 OR4C1P-202ENST00000641065 1569 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC132219.2-201ENST00000624416 2327 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 AC005839.1-201ENST00000624148 3213 ntBASIC7.06□□□□□ -1.28
DKK3Q9UBP4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.06□□□□□ -1.28
DKK3Q9UBP4 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 OFD1P10Y-201ENST00000434110 1433 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 CCL1-201ENST00000225842 592 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 RNA5SP172-201ENST00000365061 118 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AL590762.1-201ENST00000391782 432 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AL136116.2-201ENST00000404020 785 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
DKK3Q9UBP4 AC007365.2-201ENST00000428806 458 ntBASIC7.05□□□□□ -1.28
DKK3Q9UBP4 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms