Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 AC009108.3-201ENST00000602739 3515 ntBASIC6.2□□□□□ -1.42
CHD8Q9HCK8 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 RNA5SP375-201ENST00000362975 119 ntBASIC6.2□□□□□ -1.42
CHD8Q9HCK8 RANP6-201ENST00000413691 644 ntBASIC6.2□□□□□ -1.42
CHD8Q9HCK8 RPL36P1-201ENST00000419720 225 ntBASIC6.2□□□□□ -1.42
CHD8Q9HCK8 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 AP000346.3-201ENST00000622821 210 ntBASIC6.2□□□□□ -1.42
CHD8Q9HCK8 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 MAPK10-379ENST00000642013 1385 ntBASIC6.2□□□□□ -1.42
CHD8Q9HCK8 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 ADGRG6-201ENST00000230173 7026 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
CHD8Q9HCK8 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AL133351.3-201ENST00000454998 193 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC044784.1-201ENST00000456526 677 ntTSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 RN7SL180P-201ENST00000466769 294 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 RPSAP37-201ENST00000470913 821 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 MRPS21P8-201ENST00000569196 235 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC020914.7-201ENST00000594477 545 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 OR7A11P-201ENST00000597719 953 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 RCAN1-210ENST00000487990 2520 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 FAXDC2-201ENST00000326080 3251 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC135068.1-201ENST00000332663 1084 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 RPL7AP14-201ENST00000424041 802 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC115223.1-201ENST00000466377 870 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 RPL7AP23-201ENST00000482625 776 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC006499.3-201ENST00000506077 748 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC015911.3-201ENST00000592908 849 ntTSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC068802.1-201ENST00000603420 732 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC139795.3-201ENST00000606358 541 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 OR4M2-201ENST00000614722 1133 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 AC010435.1-201ENST00000623353 1177 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CCNT2P1-201ENST00000423082 1315 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CDY4P-201ENST00000418290 1513 ntBASIC6.19□□□□□ -1.42
CHD8Q9HCK8 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CEP44-204ENST00000457424 3290 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 SPATA31D1-201ENST00000344803 4833 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CHD8Q9HCK8 CELF2-204ENST00000417956 8044 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 TAF8-201ENST00000372977 6680 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 OR52B3P-201ENST00000314715 928 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 CNPY1-202ENST00000406197 560 ntTSL 5 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 RN7SKP232-201ENST00000410170 290 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AL353662.1-201ENST00000439099 327 ntBASIC6.18□□□□□ -1.42
CHD8Q9HCK8 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.18□□□□□ -1.42
CHD8Q9HCK8 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms