Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 FOLH1B-202ENST00000529567 2145 ntBASIC6.58□□□□□ -1.36
AMBRA1Q9C0C7 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC022905.1-201ENST00000503430 3048 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AKR1C4-201ENST00000263126 1192 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RNA5SP512-201ENST00000364550 120 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RN7SKP137-201ENST00000411074 307 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL161742.1-201ENST00000418154 584 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 CLIC4P3-201ENST00000422221 752 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL445528.1-201ENST00000426330 420 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 OR6C72P-201ENST00000451403 892 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 BZW1P1-201ENST00000454901 1240 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC135721.2-201ENST00000464237 300 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 DEFB109A-201ENST00000482450 265 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RN7SL182P-201ENST00000496499 300 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 OR7E163P-201ENST00000505943 894 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 MRPL49P1-201ENST00000505951 535 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC093325.1-201ENST00000508378 326 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC027338.1-201ENST00000514840 825 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC021146.10-201ENST00000515628 706 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RNU6-760P-201ENST00000516078 97 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC023158.1-201ENST00000561632 1025 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RN7SL667P-201ENST00000582817 298 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC245884.10-201ENST00000597355 337 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 CLIC4P2-201ENST00000601934 717 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL671309.1-201ENST00000603750 544 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC018754.1-201ENST00000607486 925 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 BX005040.2-201ENST00000620504 370 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC073862.4-201ENST00000622982 854 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 RNASEL-201ENST00000367559 4238 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 TPTE2P2-201ENST00000403471 1466 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 FO082842.1-201ENST00000423552 1370 ntBASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 AL390726.6-202ENST00000635962 1365 ntTSL 5 BASIC6.57□□□□□ -1.36
AMBRA1Q9C0C7 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 OR2AH1P-202ENST00000641232 2744 ntBASIC6.56□□□□□ -1.36
AMBRA1Q9C0C7 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms