Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 TVP23CP1-201ENST00000450317 639 ntBASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 MIR4732-201ENST00000581873 76 ntBASIC9.54□□□□□ -0.88
SIN3AQ96ST3 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 MIR6503-201ENST00000622884 86 ntBASIC9.54□□□□□ -0.88
SIN3AQ96ST3 CLUHP10-201ENST00000631979 980 ntBASIC9.54□□□□□ -0.88
SIN3AQ96ST3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 MTHFD1P1-201ENST00000413059 2764 ntBASIC9.54□□□□□ -0.88
SIN3AQ96ST3 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC9.54□□□□□ -0.88
SIN3AQ96ST3 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC087392.3-202ENST00000358446 1754 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 RANP6-201ENST00000413691 644 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 MRPS21P5-201ENST00000417885 231 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AL031681.1-201ENST00000443304 400 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 RPS7P11-201ENST00000484240 586 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC114324.2-202ENST00000503812 134 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC083906.1-201ENST00000509298 406 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 OR52K3P-201ENST00000531655 943 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC092718.4-201ENST00000566639 716 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 RN7SL66P-201ENST00000582099 264 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC093635.1-201ENST00000609028 555 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC099654.15-201ENST00000639802 509 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 AC007406.5-201ENST00000570140 3170 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 EEF1A1P12-201ENST00000443590 1346 ntBASIC9.53□□□□□ -0.88
SIN3AQ96ST3 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
SIN3AQ96ST3 BRD7P1-201ENST00000557705 1915 ntBASIC9.52□□□□□ -0.88
SIN3AQ96ST3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.88
SIN3AQ96ST3 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.52□□□□□ -0.88
SIN3AQ96ST3 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC9.52□□□□□ -0.88
SIN3AQ96ST3 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC008171.1-201ENST00000395058 200 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AL359092.1-201ENST00000417156 265 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AL929472.1-201ENST00000417484 429 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC092824.1-201ENST00000483524 576 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 RPL19P11-201ENST00000495944 589 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC018645.1-201ENST00000505003 109 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 MIR5095-201ENST00000578844 88 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC9.52□□□□□ -0.89
SIN3AQ96ST3 MIR212-201ENST00000586026 110 ntBASIC9.52□□□□□ -0.89
SIN3AQ96ST3 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC9.52□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms