Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNX18Q96RF0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL607077.1-201ENST00000401718 499 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 UQCRHP1-204ENST00000424609 274 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL121916.1-201ENST00000429405 308 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL591379.2-201ENST00000450223 397 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL034399.1-201ENST00000451535 380 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 RN7SL160P-201ENST00000468558 284 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC015908.1-201ENST00000478739 476 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC104629.1-201ENST00000494226 508 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 LINC01085-203ENST00000511195 326 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC134698.1-201ENST00000511619 643 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 RNU2-45P-201ENST00000516068 187 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC087257.2-201ENST00000538759 928 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 RN7SL689P-201ENST00000577215 297 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 BNIP3P40-201ENST00000596017 556 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC026979.4-201ENST00000606555 645 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC242628.1-201ENST00000606810 391 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AL138960.1-201ENST00000613838 513 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC183089.2-201ENST00000637931 916 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 AC132825.8-201ENST00000640783 297 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SNX18Q96RF0 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.44□□□□□ -1.38
SNX18Q96RF0 AP004289.1-201ENST00000436307 2205 ntBASIC6.44□□□□□ -1.38
SNX18Q96RF0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SNX18Q96RF0 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MED6-212ENST00000615788 1700 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 RPL10P16-201ENST00000325000 645 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC074375.1-201ENST00000372993 192 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL355143.1-201ENST00000407101 841 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL355862.1-201ENST00000412705 353 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 MTCYBP32-201ENST00000427945 1084 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 RPS19P6-201ENST00000441327 433 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 RPS15AP29-201ENST00000445539 400 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 TRBV5-4-201ENST00000454561 544 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AGKP1-201ENST00000455254 1263 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 RN7SL88P-201ENST00000480166 299 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC026826.1-201ENST00000493002 361 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 OR7E163P-201ENST00000505943 894 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC010374.2-201ENST00000512933 535 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 LACTB2-AS1-204ENST00000519167 793 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 EEF1B2P1-201ENST00000567221 672 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 RPS7P1-201ENST00000571702 585 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 DNAJC19P3-201ENST00000594491 331 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 FXYD6P1-201ENST00000604857 285 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC023206.1-201ENST00000605824 298 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC6.43□□□□□ -1.38
SNX18Q96RF0 AL121809.2-201ENST00000613169 341 ntBASIC6.43□□□□□ -1.38
SNX18Q96RF0 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms