Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 OR7E94P-202ENST00000601375 790 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL050403.2-202ENST00000603462 492 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 SMIM11B-203ENST00000622934 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC211433.3-201ENST00000623770 375 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL583859.2-201ENST00000634462 1127 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AC011471.4-201ENST00000638271 216 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 COG2-209ENST00000534989 2963 ntTSL 2 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 GTF2IP4-201ENST00000453092 2054 ntBASIC5.03□□□□□ -1.6
AP1S3Q96PC3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
AP1S3Q96PC3 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CYP3A43-202ENST00000312017 1349 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 FOLH1B-202ENST00000529567 2145 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 RNU1-38P-201ENST00000362817 144 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 HIST1H2BPS2-201ENST00000402707 340 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 NPM1P37-201ENST00000403105 874 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 RN7SKP188-201ENST00000410789 317 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL138828.1-207ENST00000417643 734 ntTSL 5 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL158070.1-201ENST00000421614 631 ntTSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 HCG25-217ENST00000422366 702 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL035691.1-201ENST00000434562 595 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL353653.1-202ENST00000435177 539 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CRYGGP-201ENST00000443337 145 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 RN7SL382P-201ENST00000482631 282 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 RN7SL306P-201ENST00000492941 296 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AC034206.1-201ENST00000509372 474 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 DAZAP2-208ENST00000549555 872 ntTSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL031846.1-201ENST00000560933 314 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 MIR4470-201ENST00000583453 72 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL132821.1-201ENST00000616029 394 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 AL139254.2-202ENST00000641937 1156 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 MAPK10-379ENST00000642013 1385 ntBASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
AP1S3Q96PC3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 MFSD8-256ENST00000641949 1640 ntBASIC5.01□□□□□ -1.61
AP1S3Q96PC3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 AP001157.1-201ENST00000550837 2339 ntBASIC5.01□□□□□ -1.61
AP1S3Q96PC3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 OR2M1P-201ENST00000318104 951 ntBASIC5.01□□□□□ -1.61
AP1S3Q96PC3 FAM32BP-201ENST00000344033 333 ntBASIC5.01□□□□□ -1.61
AP1S3Q96PC3 RNA5SP483-201ENST00000363431 118 ntBASIC5.01□□□□□ -1.61
AP1S3Q96PC3 ARMCX7P-201ENST00000372828 562 ntBASIC5.01□□□□□ -1.61
AP1S3Q96PC3 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.01□□□□□ -1.61
AP1S3Q96PC3 OR5P4P-201ENST00000424698 917 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms